Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00776 ATGGAACCAAAATGGAGCACCATTCTGCCAGCAACCTCCATATTCTCCAGCTTCGATGACCTCAAATGGATCACAGCAGAATTTGATCATGAACTTTTCACGAAGCGGCCCATTACTGTCGAAACAACAATCGACGACAACGACGTGAAACCGTGTAAGGTGGATCCATTCATAGGTGTCAGCGATGTTTGCTCTGGTAACATCGCCGATGCCGCCGATTTTCATAATCTGGATGCCGTAACTTCATTTTCAACATGTGGTGAACCAACAAATAACACTCTTGTTTGCTCCCAAAACCAAACTCCCAAGAACTCCACCATCACTGCAACTATTGAGTCTCAATCATCCATTTCTGCCACCGTTACAAGTCCAGTGTCAGCTAATAAACCAAGCAGTAGAGAAACTCAAACCAAAGGAGTGACTACTACAAGTGGTTCCTCACGTGATCCATCTGATGAAGATGATGAAGCAGGTCCTTGTGAACAAAGCACAAACCCTGTTGATATGAAGCGTCTTAGAAGGAAGGTTTCTAATCGTGAGTCTGCCAGAAGGTCCAGAAGAAGAAAACAAGCACATTTGGCAGACCTTGAGGTTCAGGTTGAACAACTGAGGCTGGAAAATGCAAGCTTATTTAAGCAGCTTACAGATGCAAGCCAACAATTTCGTGATGCTAACACTAATAACCGAGTGCTAAAATCCGATGTTGAAGCTTTGAGAGCTAAGGTGAAGTTAGCAGAGGATATGGTCTCTAGGGGCACTTTACCTACTTTTAACAACCAGCTTCTCCAAAATCAGAGTCAATTGAACACCACCCCGACGCAAATCAACAATAGTAATCTCCGTTGCATGGCACATGTTTCGCCCACCATCACCGTCCATGGAAACGACGCTTCATATGGTGTTAGTGGACAGAATTCAGCTATTGGACTTGGAGATTTTGATATATCTTGCAGTCATGATTTCAACAATGGAGTTAATAGTGATGTTGTCAGCTCTTTGACTAGCTTATGGCCATAA 1017 0.4356 MEPKWSTILPATSIFSSFDDLKWITAEFDHELFTKRPITVETTIDDNDVKPCKVDPFIGVSDVCSGNIADAADFHNLDAVTSFSTCGEPTNNTLVCSQNQTPKNSTITATIESQSSISATVTSPVSANKPSSRETQTKGVTTTSGSSRDPSDEDDEAGPCEQSTNPVDMKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLFKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVSRGTLPTFNNQLLQNQSQLNTTPTQINNSNLRCMAHVSPTITVHGNDASYGVSGQNSAIGLGDFDISCSHDFNNGVNSDVVSSLTSLWP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00776 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 173 188 IPR004827 GO:0003700|GO:0006355
Mepo4g00776 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 231 IPR004827 GO:0003700|GO:0006355
Mepo4g00776 338 PANTHER BASIC LEUCINE ZIPPER 63 92 300 - -
Mepo4g00776 338 CDD bZIP_plant_GBF1 171 222 IPR045314 GO:0003700|GO:0006355
Mepo4g00776 338 MobiDBLite consensus disorder prediction 113 147 - -
Mepo4g00776 338 FunFam BZIP transcription factor 168 219 - -
Mepo4g00776 338 SUPERFAMILY Leucine zipper domain 170 220 IPR046347 GO:0003700|GO:0006355
Mepo4g00776 338 Gene3D - 169 226 - -
Mepo4g00776 338 Pfam bZIP transcription factor 169 220 IPR004827 GO:0003700|GO:0006355
Mepo4g00776 338 MobiDBLite consensus disorder prediction 113 191 - -
Mepo4g00776 338 SMART brlzneu 166 230 IPR004827 GO:0003700|GO:0006355
Mepo4g00776 338 Coils Coil 179 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00776 Mepo-Chr4 10209399 10214917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00776 112 338 bZIP Transcription Factor Family AT5G24800 50.000 6.43e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo4g00776 bZIP_1 5.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00776 K25784 - gmx:778193 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07555 3 88891830 88896177 Mepo4g00776 4 10209399 10214917 PCT