Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00749 ATGGCAGTGGAACTCATGGGGTTCCCAAAAATAGATGAACAAAAAGCCATACAAGAGGCTGCATCAGAAGGACTCAAAGGCATGGAACACTTGATCCTAACCCTTTCTCATCAACCAACTCAATTAAACACTCAACTAACCGACCACACCGTTTCTAAGTTCAAGAAACTCATCTCTTTACTTAACCGAACCGGTCACGCCCGGTTCAGACGCGCCCCGGTTCATTCCTCCTCATCTTCACCACCGGTTCAGATTCAATCAACACCTTCACCGGTTCAAACACCAACCGTGTCACTACCAAAACACTTTCCTTCTCCGTCACCGGCACTGACACCGACGCCAATCTCCGTCCGTCACGCGCCGGCGAGTTTTGTTCAACCACAATCACACAGCATGACACTCGATTTCACGAAGCCAAACGACGTCGTTTTGAGCTCAAACACGAAAAACTCCATCGTTGAGCTTGAATTCTCGAAGGATACAGCAACGTTTAGCGTTTCATCAGCTTCGTCGTTTATGTCATCTGCTATTACCGGTGATGGAAGCGTTAACGGGAAACAAGGATCTTCGATTTTTCTCAATCCGGCGGCGACACCAGCTATCTCCGGTGGGAAACCGCCGCTATCGGCGGTGCCGTCTAAGAAAAGGTGTCATGATCATGGTGAACACTCCGATGACGTTTCGGGGTCGAATAAGTGCCACTGTGTTAAGAGAAGAAAAAATAGAGTGAAGAGGACTGTAAGAGTACCAGCGATAAGTTCAAAGACCGCCGATATACCACCGGACGAGTACTCATGGCGGAAATATGGTCAAAAACCGATCAAGGGATCACCATATCCACGAGGCTATTACAAGTGTAGCACTGTAAGAGGGTGCCCAGCAAGGAAACACGTGGAGCGTGCAACAGACGATCCAACGATGCTGATTGTAACGTATGAAGGAGAGCACAGACACACTATTCAAGCTGCAATGCAGGAGAACGCAGCCGGGGTTTTGGGTTTGGTATTTGAGTCAACGTCATAA 1023 0.4839 MAVELMGFPKIDEQKAIQEAASEGLKGMEHLILTLSHQPTQLNTQLTDHTVSKFKKLISLLNRTGHARFRRAPVHSSSSSPPVQIQSTPSPVQTPTVSLPKHFPSPSPALTPTPISVRHAPASFVQPQSHSMTLDFTKPNDVVLSSNTKNSIVELEFSKDTATFSVSSASSFMSSAITGDGSVNGKQGSSIFLNPAATPAISGGKPPLSAVPSKKRCHDHGEHSDDVSGSNKCHCVKRRKNRVKRTVRVPAISSKTADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLIVTYEGEHRHTIQAAMQENAAGVLGLVFESTS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00749 340 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 324 IPR044810 GO:0003700
Mepo4g00749 340 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g00749 340 MobiDBLite consensus disorder prediction 203 232 - -
Mepo4g00749 340 FunFam WRKY transcription factor 65 244 321 - -
Mepo4g00749 340 Pfam WRKY DNA -binding domain 262 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g00749 340 SUPERFAMILY WRKY DNA-binding domain 256 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g00749 340 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g00749 340 MobiDBLite consensus disorder prediction 212 232 - -
Mepo4g00749 340 MobiDBLite consensus disorder prediction 70 111 - -
Mepo4g00749 340 Pfam Plant zinc cluster domain 214 258 IPR018872 -
Mepo4g00749 340 Gene3D WRKY domain 243 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g00749 340 MobiDBLite consensus disorder prediction 73 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00749 Mepo-Chr4 9927475 9930132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00749 1 338 WRKY Transcription Factor Family AT2G24570 59.429 1.25e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo4g00749 WRKY 7.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00749 - - tpra:123902288 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00749 4 9927475 9930132 Mepo4g00749 4 9927475 9930132 ECH