Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00748 ATGATGGTGGATGATTTCATATGTATGGGCGTTTGGCAACCTTGGAACTTAAGGCCGAGTCCACTTGGAAATGATGTGTTTGGAATTTCCCTACCAGGTTCTGGAAAGACTGTGGCTTTTGTTCTTCCTATATCGCACGCCCTCTTGGAAACCGAACCCAACCTAACCCCTTTCTTTGCTTGTGAGCTCTATCCCTCAAGGAGACTTGCCTTTCAAACAGCTGACCACTTTCGAAATCTAGGCTCTCAGTTTGGTGTCAAGTGTGCTATCATTGTTCAAGAGAACCGCAAGGAACACGAATCCATCCTGAATTCAGAGCAACCTCGTATTATTGTTGGGAGGCCTGACCTAATCTTATATCACCTAAAACACACCCAAGGATTTTCTCTTGCTCTTGCTAGTTTAAAGTACCTGGTATGA 420 0.4452 MMVDDFICMGVWQPWNLRPSPLGNDVFGISLPGSGKTVAFVLPISHALLETEPNLTPFFACELYPSRRLAFQTADHFRNLGSQFGVKCAIIVQENRKEHESILNSEQPRIIVGRPDLILYHLKHTQGFSLALASLKYLV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00748 139 Pfam DEAD/DEAH box helicase 23 139 IPR011545 GO:0003676|GO:0005524
Mepo4g00748 139 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 17 139 IPR014001 -
Mepo4g00748 139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 139 IPR027417 -
Mepo4g00748 139 PANTHER RNA HELICASE 22 139 - -
Mepo4g00748 139 Gene3D - 11 139 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00748 Mepo-Chr4 9922845 9926021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00748 22 119 Eukaryotic Initiation Factors Gene Family AT5G11200 33.000 9.72e-06 42.0