Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00732 ATGTCAGGATTAACGTGCAATTCTTGCAACACAGAATTCACACATGACGCTGATCAAAAGCTTCATTACAAATCTGAATGGCATCGCTACAATCTCAAACGCAAGGTGGCTGGGGTTCCTGGAGTGACAGAAGCATTGTTTCTAGCTAGACAAGCTGCACTTGCTCAAGAGAGGGATAAATCTAATGAAAGCCCTATGCTCTATAGTTGTGGCCTCTGTGGCAAGGGATACAAAAGTGAAAAGGCTCATGCCGAGCATCTTAAGTCAAGAACTCATATGATGCGGGCTTCTGAAGGAGATAGCCAGTCAGACGGGAAGGCTATAATTAAGCCACTTCCACAACGTGTTGCGAATAAGCCTCCTCCTAAAAAAGTGGTTGATAACTCTGCAGAAGATGATGACAGTGAAGATGAATGGGTGGAGGTTGATTCTGATGATGATCTGGTTGATGATGCTGCAAAGTCCTTGACAGATATGAACATGGACGAGAATGCTGAAAATGATGACATGGATGAGGATGATGATGATGGTGTGGACTTAGATCCAACCTGTTGTTTTATGTGTGATCATAAGCACAAAACAATAGAAAACTGCATGGTTCATATGCACAAGCATCATGGATTCTTCATTCCAGATGTTGAGTATTTGAAAGATCCAAAAGGACTCCTCACTTATCTTGGACTGAAGGTCAAAAGAGACTACTTGTGTCTGTACTGCAACGATCGGTGTCATCCTTTCAGCAGCTTGGAAGCAGTCAGGAAACACATGGTAGCGAAAAATCACTGCAAGGTGCATTATGGTGATGATGACGACGAGGAGGAAGTAGAGTTGGAAGAATTCTATGATTATACCAGCAGTTATGTTGATGAGCAAGGGAAGCAGCTAGTTGTATCCGGTGATGCTGATAATAATATAGAACTTAGTGATGGGTCTGAGCTCGTAATCACTAAGGTGTCTGGTGACAAAAAATCAACTAGAACTCTAGGTTCCCGTGAATACTTGCGTTATTATCGTCAGAAACCTCGTCCATCACCAGCGAATAACATTGCCATTACTGCGGAATTGGCTGCAAGGTACAGGAGCATGGGTTTGGCCACTGTCCAATCAAGGCAGCAAATTGTGAGAATGAAAGTGTTGAAGCAGATGAACAGATCAGGTGTGGAGCATATGCGTAGCAAGATGGGGATGAAGAGTAATGTAATCCGGAACCTGCCAAACAACGTCACATATTAG 1233 0.4323 MSGLTCNSCNTEFTHDADQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQAALAQERDKSNESPMLYSCGLCGKGYKSEKAHAEHLKSRTHMMRASEGDSQSDGKAIIKPLPQRVANKPPPKKVVDNSAEDDDSEDEWVEVDSDDDLVDDAAKSLTDMNMDENAENDDMDEDDDDGVDLDPTCCFMCDHKHKTIENCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYLCLYCNDRCHPFSSLEAVRKHMVAKNHCKVHYGDDDDEEEVELEEFYDYTSSYVDEQGKQLVVSGDADNNIELSDGSELVITKVSGDKKSTRTLGSREYLRYYRQKPRPSPANNIAITAELAARYRSMGLATVQSRQQIVRMKVLKQMNRSGVEHMRSKMGMKSNVIRNLPNNVTY 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00732 410 SMART c2h2final6 68 92 IPR013087 -
Mepo4g00732 410 SMART c2h2final6 183 205 IPR013087 -
Mepo4g00732 410 SMART c2h2final6 4 28 IPR013087 -
Mepo4g00732 410 SMART c2h2final6 234 261 IPR013087 -
Mepo4g00732 410 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Mepo4g00732 410 MobiDBLite consensus disorder prediction 85 99 - -
Mepo4g00732 410 Pfam C2H2 type zinc-finger (2 copies) 185 286 IPR041661 -
Mepo4g00732 410 SUPERFAMILY beta-beta-alpha zinc fingers 4 36 IPR036236 -
Mepo4g00732 410 SUPERFAMILY beta-beta-alpha zinc fingers 58 98 IPR036236 -
Mepo4g00732 410 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Mepo4g00732 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 97 IPR013087 -
Mepo4g00732 410 SUPERFAMILY beta-beta-alpha zinc fingers 169 244 IPR036236 -
Mepo4g00732 410 Pfam Zinc-finger of C2H2 type 68 92 - -
Mepo4g00732 410 MobiDBLite consensus disorder prediction 85 147 - -
Mepo4g00732 410 PANTHER ZINC FINGER PROTEIN 622 1 408 IPR040025 -
Mepo4g00732 410 MobiDBLite consensus disorder prediction 131 147 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00732 1 410 C2H2 Transcription Factor Family AT4G31420 63.373 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00732 K14816 - gmx:100809681 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00732 4 9795014 9798221 Mepo4g00732 4 9795014 9798221 ECH