Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00726 ATGTTCTCCAATTCCCAATTCGATGCCTCCAACGCCTTCTCCGGCGGCGGTTTCATGTCCTCGCAACCCAACGATTCTTCTCCGGCACCGACTAAAAGTCGTGATTCTCAGGGTTTGATTCCGGTTACGGTGAAGCAGATAAGTGAAGCTTCTCATTCTGGTGATGAAAAGTCCAACTTCTCAATTAACGGTGTAGATCTGACTAATGTTACATTGGTTGGATTGGTGTATGAGAAAACAGAGAGGAACACAGATGTTAATTTTGTTTTGGATGATGGAACTGGACGGATCAAATGCCGAAGATGGGTAAATGAGACTTTTGACACAAAGGAAATGGAAGAAGTACTGAATGGCATGTATGTTCGTGTTTATGGGTCCTTGAAAAGCTTTCAAGGTGTAAGGCAACTTGTTGCCTTCTCTGTCAGGCCTGTGACAAATTTTGATGAGATCCCGTTTCACTTTATCGACTGCATACATAACCACCTCCGCAGCAAACTAAAGATAGAAGGAATCACTTCTGCACTTCCTTCATCAAACTCGTCTATGAATACTCCTGTCAGAAATGTCTCAAATGGATCTCAGGCACCATCATCAAATCCGGGATATGTACAATATAGCACTGATGGACTCAAGGATATTGATAAATTGCTCCTTAACTATCTGCAGCAGCATTCACACATAGATATGGGAGTACATGTTGATGAGTTATCAAGAGAGCTCAAGCTTCCATTGGACAAGATCATGTTGTTGCTGAAGACTCCTTTAGAGGAAGGTGTGATTTACTCCACCATAGATGATTCCCACTACAAACTTGCTTGA 819 0.4237 MFSNSQFDASNAFSGGGFMSSQPNDSSPAPTKSRDSQGLIPVTVKQISEASHSGDEKSNFSINGVDLTNVTLVGLVYEKTERNTDVNFVLDDGTGRIKCRRWVNETFDTKEMEEVLNGMYVRVYGSLKSFQGVRQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKLKIEGITSALPSSNSSMNTPVRNVSNGSQAPSSNPGYVQYSTDGLKDIDKLLLNYLQQHSHIDMGVHVDELSRELKLPLDKIMLLLKTPLEEGVIYSTIDDSHYKLA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00726 272 FunFam replication protein A 32 kDa subunit A-like 32 166 - -
Mepo4g00726 272 Gene3D - 31 165 IPR012340 -
Mepo4g00726 272 Pfam OB-fold nucleic acid binding domain 70 142 IPR004365 GO:0003676
Mepo4g00726 272 PIRSF RPA32 1 272 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo4g00726 272 PANTHER REPLICATION PROTEIN A-RELATED 6 270 IPR040260 -
Mepo4g00726 272 Gene3D - 204 272 IPR036388 -
Mepo4g00726 272 FunFam Replication protein A 32 kDa subunit 205 272 - -
Mepo4g00726 272 Pfam Replication protein A C terminal 180 266 IPR014892 -
Mepo4g00726 272 MobiDBLite consensus disorder prediction 1 38 - -
Mepo4g00726 272 CDD RPA2_DBD_D 69 162 - -
Mepo4g00726 272 MobiDBLite consensus disorder prediction 179 200 - -
Mepo4g00726 272 SUPERFAMILY Nucleic acid-binding proteins 39 163 IPR012340 -
Mepo4g00726 272 SUPERFAMILY "Winged helix" DNA-binding domain 208 271 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00726 Mepo-Chr4 9735160 9740235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00726 1 270 Core DNA Replication Machinery Family AT2G24490 48.201 9.82e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00726 K10739 - gmx:100802512 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00726 4 9735160 9740235 Mepo4g00726 4 9735160 9740235 ECH