Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00698 ATGGCTGAGAGAATTTCCATCGGAAATGCTGGGGACAAAAACCTCAAGCGCAAAATGATGGAGGAGCCAGAGCCAGAGTCAAAATCAGAGAAGGAGCAAAAGGCAATACCACCAACCTCTGAATCAGATGTTGAGGATTTGCTGACCCTAAGGCTTGGCTTCCACCCAATGCCCACTTCCAAAGCCTTGGAGAAGGGCGAACCTTCACGTTCATTTCAGAATGCTGCTGATGAACCTTTACCTGAGCAAGACGTGAGGGAATTCCCCTGTCAGTACTGTGACAGGAAATTCTCCACTTATCAGGCTCTTGGAGGACATCAAAACGGTCATAAGCGTGACCGGGTCTTCAAAAAACAGGAAGACAAAAGGAAGGAGATAGATTTACTCCGAAGGATCGTAGCTACTAATCAACCATACCCTCATCCATTTTCAAGTCCTACTCCCTATCAAGGGCATCCAAATTTCTGTAGTGCTAACTTGCACAACCCAGTTGGTGCCCATGTGAACAATACCTTGCCTTCTTGGCTTGGTTCACCTTCTGGTGGCTATGGAGGGATGCATATGCCACATTCACCCCTTGCAACACCACAATTTGGGATGATTAATTTTTGGCGTGTAGGTCAAAATGCTGAATTGCCAATTCCACAAAAGTCAAACACTTCAGGTTTGGGACTTTTTGCTCCAGCAAATCAAACTCCTCCATTGGCTGAGGGTGCAGAGAGAACTTTCATCGATCAAATTCATTCTCATGCTCTTCCATTATTATCTCGTGATCCTACTAGAGAAGACATAATTCAGGCAAATCCCAATGTGCCCTCATCATCAACTCAATCAACCTCGGAGGAACTCAACTTGAATCTCCCCCTTTAA 870 0.454 MAERISIGNAGDKNLKRKMMEEPEPESKSEKEQKAIPPTSESDVEDLLTLRLGFHPMPTSKALEKGEPSRSFQNAADEPLPEQDVREFPCQYCDRKFSTYQALGGHQNGHKRDRVFKKQEDKRKEIDLLRRIVATNQPYPHPFSSPTPYQGHPNFCSANLHNPVGAHVNNTLPSWLGSPSGGYGGMHMPHSPLATPQFGMINFWRVGQNAELPIPQKSNTSGLGLFAPANQTPPLAEGAERTFIDQIHSHALPLLSRDPTREDIIQANPNVPSSSTQSTSEELNLNLPL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00698 289 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Mepo4g00698 289 MobiDBLite consensus disorder prediction 265 289 - -
Mepo4g00698 289 Gene3D Classic Zinc Finger 69 137 - -
Mepo4g00698 289 MobiDBLite consensus disorder prediction 10 39 - -
Mepo4g00698 289 Pfam C2H2-type zinc finger 88 108 - -
Mepo4g00698 289 SUPERFAMILY beta-beta-alpha zinc fingers 86 117 IPR036236 -
Mepo4g00698 289 MobiDBLite consensus disorder prediction 266 289 - -
Mepo4g00698 289 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 65 192 IPR044246 GO:0009788
Mepo4g00698 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Mepo4g00698 289 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00698 Mepo-Chr4 9459142 9460011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00698 76 206 C2H2 Transcription Factor Family AT5G25160 31.111 1.70e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g00698 zf-C2H2_6 3.9e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00698 - - tpra:123892015 289.271