Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00679 ATGGAGCGACCCGGGAGCGTCAACGACGGTCAACATATTATAGAAATAGCTGGGAGTGCCGAGGCTTCTACATCCGCCTCGTCTCGTGATAGACAATTTAACGAGGTAGATGTGTCGCATCGTGAAGAAAGAGTAGGTGCTGTGCGGTTAACTGTTGGTCAGAATTCAGTTTCAACCTCGGGCATATCAACTGAATCAAATAGGAGGAATTCTTCTTCTGTAAGGAGAGGGGACGCTCGTCGGAGTCGGAGTCCTGTGCATTCTGGGCTATGGATATCTATTGAGCTAGTCCTCTTAGTAAGTCAGATTGTTGCATCTATTGTTGTTTTGTCGCTGTCAAGGAATGAGCATCCACAGACCCCGTTGTTTCAATGGATAGTGGGCTATGCTTCTGGATGTGTTGCTACCCTCCCTCTTCTTTTTTGGCGGTATTATAATCACAACCATCTGCGAGAACAAGATTCAGCTCAGTCACGTCAAACATCTCCTCGGATTAGTGATCCTTCTGGGACATTTCTTTCGATTTCCAGAAATAACGGAGATGCTGGTCAGGCTGCTGCTGCATCCTCCAGAAGTAATCAAACTTCAATATTGATGAATAGAAGAATGAAGATACTTGTGGAATACTTTAAAATATCCTTAGATTGCTTTTTTGCTGTGTGGTTTGTTGTTGGAAACGTATGGATCTTTGGAGGACGATCTTCTGCTGTTGAAGCTCCTAACTTGTATAGGTTGTGTATAGTGTTCCTTGCATTTAGCTGTATTGGTTATGCCATGCCTTTCATTCTCTGTTCAACCATCTGCTGTTGTCTCCCGTGTATAATTTCCATCCTTGGCGTTAGAGAGGATCTGACACAAAACAGAGGAGCAACTTCTGAATCCATTAATGCTCTACCAACTTACAAGTTCAAGATGAAGAAAAATAAAAAAAATAGTGAAAACAACTCTGCCAATATAGAAGGTGGAACTGTTGCCGCAGGAACCGAAAAAGAGCGTGTGATCTCTGGAGAAGATGCAGTTTGCTGCATCTGCCTGGCCAAGTATGAAAACAACGATGAGCTGAGAGAGTTGCCTTGTTCTCATCTTTTCCACAAAGATTGCGTTGATAAGTGGTTGAAGATAAATGCATTGTGCCCGCTTTGCAAGAGTGAAGTTGGTGAAGACCTAACAGGATTGGGGTCTGGAGAAGATGCCACCCAAACAACGGGATGA 1212 0.4373 MERPGSVNDGQHIIEIAGSAEASTSASSRDRQFNEVDVSHREERVGAVRLTVGQNSVSTSGISTESNRRNSSSVRRGDARRSRSPVHSGLWISIELVLLVSQIVASIVVLSLSRNEHPQTPLFQWIVGYASGCVATLPLLFWRYYNHNHLREQDSAQSRQTSPRISDPSGTFLSISRNNGDAGQAAAASSRSNQTSILMNRRMKILVEYFKISLDCFFAVWFVVGNVWIFGGRSSAVEAPNLYRLCIVFLAFSCIGYAMPFILCSTICCCLPCIISILGVREDLTQNRGATSESINALPTYKFKMKKNKKNSENNSANIEGGTVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEVGEDLTGLGSGEDATQTTG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00679 403 MobiDBLite consensus disorder prediction 19 38 - -
Mepo4g00679 403 Pfam Ring finger domain 341 382 IPR001841 -
Mepo4g00679 403 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 325 393 IPR013083 -
Mepo4g00679 403 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 385 - -
Mepo4g00679 403 SMART ring_2 341 381 IPR001841 -
Mepo4g00679 403 FunFam E3 ubiquitin-protein ligase 324 390 - -
Mepo4g00679 403 MobiDBLite consensus disorder prediction 57 81 - -
Mepo4g00679 403 SUPERFAMILY RING/U-box 332 388 - -
Mepo4g00679 403 ProSiteProfiles Zinc finger RING-type profile. 341 382 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00679 Mepo-Chr4 9125367 9130799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00679 68 387 C3H Transcription Factor Family AT1G80400 56.748 9.43e-140 403