Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00675 ATGAGGGAGAGCAAAATGGACAAAGAAAATGGTGTGACTGTGAGGGTGACTCGAGCAAGGGCAAGAGCTTTGAAGAAGTCTTCAAGAAATGAACAAGCTGTTGTTGTTGGACTCAAAGATGTGACCAACATTTCTGCAAAATCACATAAGCGTGTCCATACATCAAATTTTCAGAAGAAAGAAGGTTCTAAGAAGAGAAAGACCAATGTTGCTTCAGAAGATGATGTCTCCTTGCAAGTTTGGACAACCAAAGAGGATGCAAAGAAAGAGTTAGCTAAAGATTCTTCAACATCAACAATGACAAAGAAAGAGTCCTTGCAAGTGCAGCCTTCTGTGGAAAACCCCCTGCTCTCAATGCAGGACACTCTCAACTCTCCAAACACAGACATAAATTTGATATGTGAGAAAGTAAGTGCCTCAGTTGGCTTGGGAATTGTGGACATTGATTCAAAGTTAAAGGATTCTCCTATTTGGACTTCTTATGCCCCTGATATATACACTAGTATTCATGTCAGAGAGTGTGAAAGGAGGCCATTAGCCAATTACATGGAAACATTGCAGCAAGACATCACTCCCGGCATGAGGGGAATTCTGGTTGACTGGCTTGTGGAGGTTGCTGATGAGTTTAAACTAGTTCCAGACACACTTTACCTTGCTGTGAATCTCATTGATCGATTCCTTTCCCAACGTTTGATTACCAAACGAAGGCTGCAGTTGCTTGGTATTACTTGCATGCTGATTTCATCTAAGTATGAAGAGATTTGTGCTCCTGGAGTTGAAGACTTTTGCGTCATCACAGATAATACATACTCCAGACAAGAGGTATTGAAAATGGAGAAAGAGGTACTTAATCTTCTGCATTTTCAATTAGCTGTTCCCACAATCAAGACATTTCTCAGGAGGTTCATCCAAGTAGCACAAACTTCTTCCAAGGTTGCTCAAGCTGACCTGGAATTCCTGGCAAATTATTTAGCAGAGCTAGCACTTGTTGAATACAGCTTCTTGCAGTTTCAACCTTCCAAGATAGCTGCATCTGCTGTGTTACTTGCCAGATGGACCCTCAGCCAGTCAGAGCATCCATGGAATCCAACTCTGGAGCACTATACAAATTACAATGCATCAGAGCTGAAAACTACTGTCCTTGAACTGACGGATTTGCAACTTAACACCAAAGGCTGTCGTCTCAGTGCAGTACGTGAAAAATATCAACACCAGAAGTTCAATAGTGTGGCGAATTTGTCTCCGAAACCGGTGGAATCTCTTTTCTAG 1269 0.4192 MRESKMDKENGVTVRVTRARARALKKSSRNEQAVVVGLKDVTNISAKSHKRVHTSNFQKKEGSKKRKTNVASEDDVSLQVWTTKEDAKKELAKDSSTSTMTKKESLQVQPSVENPLLSMQDTLNSPNTDINLICEKVSASVGLGIVDIDSKLKDSPIWTSYAPDIYTSIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVADEFKLVPDTLYLAVNLIDRFLSQRLITKRRLQLLGITCMLISSKYEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASAVLLARWTLSQSEHPWNPTLEHYTNYNASELKTTVLELTDLQLNTKGCRLSAVREKYQHQKFNSVANLSPKPVESLF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00675 422 SUPERFAMILY Cyclin-like 156 290 IPR036915 -
Mepo4g00675 422 SMART Cyclin_C_2 293 416 IPR004367 -
Mepo4g00675 422 FunFam Mitotic cyclin 6 178 278 - -
Mepo4g00675 422 PIRSF Cyclin_A_B_D_E 1 421 IPR046965 GO:0016538|GO:0044772
Mepo4g00675 422 Gene3D - 164 412 - -
Mepo4g00675 422 MobiDBLite consensus disorder prediction 46 72 - -
Mepo4g00675 422 Pfam Cyclin, C-terminal domain 293 415 IPR004367 -
Mepo4g00675 422 CDD CYCLIN_AtCycA-like_rpt2 293 407 - -
Mepo4g00675 422 ProSitePatterns Cyclins signature. 195 226 IPR006671 -
Mepo4g00675 422 Gene3D - 178 291 - -
Mepo4g00675 422 MobiDBLite consensus disorder prediction 55 72 - -
Mepo4g00675 422 MobiDBLite consensus disorder prediction 87 109 - -
Mepo4g00675 422 Pfam Cyclin, N-terminal domain 164 290 IPR006671 -
Mepo4g00675 422 PANTHER CYCLINS 96 404 IPR039361 -
Mepo4g00675 422 SUPERFAMILY Cyclin-like 292 415 IPR036915 -
Mepo4g00675 422 FunFam Cyclin A1 280 412 - -
Mepo4g00675 422 SMART cyclin_7 297 385 IPR013763 -
Mepo4g00675 422 SMART cyclin_7 200 284 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00675 Mepo-Chr4 9071169 9076236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00675 14 422 Core Cell Cycle Gene Families AT5G25380 50.237 5.55e-128 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00675 K06627 - gmx:100777132 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00675 4 9071169 9076236 Mepo3g07483 3 88168296 88173411 PCT