Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00649 ATGAAGATGTTTGGAATAAAGTCTTTTGGTCGTAAAAATGATAAACAAAAACAAACCAAAGATGATTCTAGCAGCCAATACAGTCTTACCGGATTCATTCCATCTCTCGGTGCTGCCACCGTGTATGGCAGCAAGAGACAAGAGCTCCGGCGTTACATCATCTCCCCAAGCAACCGTCATTATCGACAATGGTGCAAATTTTTGATGATATGGGTTTTCTACACTGCATGGGTGTGTCCTTTTGAATTTGGGTTTCTTGAGAAATCAAGGGGTGCACTAGCTTATGCAGACAGCATTGTGAATGGATTTTTTTTCATTGACATTGTTCTCACCTTCTTTGTTGCCTACGTTGACAAGACTACTTTTCTACTCGTCGACGATCAATGGAAAATTGCTTCGAGATATTTGAAATCTTGGTTCATCCTTGATGTGCTCTCTATCATTCCTTATGAAGGTGCTGTGTATTTGTTGCCAACTTCACTCGAGATGTATGGCTACTTCAATATTCTTCGCCTTTGGCGCCTTCGTAGAGCTAGTGCCACGTTTTCAAGGTTAGAAAAGGATAGGAATTATAACTACTTTTTGGTGCGCTGTTTAAAACTGACATGTGTAACACTATTTGCGCTGCATTGTGCTGCCTGTTTTTTCTATTTTCTGGCTACAGTACGCAACGATAAGAAAGTTACATGGCTATCACTTGTCTCTGATGCAGACAACCTAACTATGTGGGATGGATATGTAACATCATTATATTGGTCCATAGTTACACTTTCAACAGTTGGTTATGGAGATTTGCATCCTGTAAATACAGATGAAATGATTTTTGACATTTTTTATATGCTATTCAATTTTGGACTTCATGCATATCTAATAGGAAACATGACCAATTTGGTTGTGCATTGGACAGATAGAACTAAGAGATATAGGGATACTGTCCAAGCTGCATCAAATTTTTCTTGTAGGAATCGGTTACCTAAACGGTTACAAGAGCAGATATTTGCTCATTTTCATATGAAGTACAAAACAAATTTAGAAGGATTAGAGCAACAAGAGATAATGGATTCCCTTCCAAAAGCCATTAAGTCGAGCGTTGCACACTACCGATTCTTTGAACGCATCCAAGACGTATACTTGTTTAATGGAGTGTCAAGCGACTTACGATTTCAACTGGTGACGGAGTTGAAGGCCGAGTTTTTTCCTCCAAAGGAAGATGTAGTCTTGCAGAATGAATCACCAACAGACTTTTATATAATGGTTGTTGGAGCTGCTGCAAGTTTCATCTGCATTCCTTTATATGATATCATGAAAAATCTTATTTCCATACGACTAACAAAATATGTTTGCAAATTGTATCAGACTTTTAAAGAGGCAACGACAGGAGATGTTTTTGGAGAAATAGGAGTGCTATCTTATAGGCCACAACCTTATACAGTTCGGACCAAACGATTAAGCCAGATCTTGCGTTTGAGTCGATCAACATTTCTAACCCTTGTTCATAACAATGTTGAAGACGGAACAATAATCATGAACAATTTTCTTCAGCATGTGCAAAATTTAAAGTATCCGATGATTGATGGTGTTCAAGCTGAAATCGAGTCAATGTTGTCAAAAGGCAAAATGGATTTGCCTATAAGTTTAATATATGCAGCTAACAAACCTGATGACATGTTGTTGCATCAATTGCTGAAGAAGGGTTCAGATCCAAATGAAATAGATAATAAAACTGGAAGGACAGCACTGCATATTGCAGCTTCTAAAGGTAATAACCATTGTGCGGTTTTGCTTCTTGAATTCGGAGCTGATCCCAACATACAAGATTTTGAAGGAGATATACCACTATGGGAAGCAATTAAGGGAGGGCATGAATCAATGATAAAACTACTTATGGACAATGGTGCCGATATATCTTCTGCCAATGTAGCTAGTTTAGCATGCTTTGCTGTGGAGAAAAATAACATTCAATTGCTAAAAGATATTGTAAAATATGGTGGTGATATTGTGACAAAGTCCACAAATGATGGAACCACTGCACTTCATACTGCTGTATGTGATGGAAATGTTGAAATAGTTAAGTTTCTTGTAGAACAAGGAGGAGATATTGATAAGCCAGATGGCTTTGGTTGGAGTTCAAGAGCTTATGCAAATCAACAATGCCATGAAGAAATACAAAATATGTTTAAAGAAATTGAACAAGATAACACAATTCCTTATGAAAAGCCAAATAATAATGGAGGGCCATTTATTGAAAAGGGTCAACGTGAACCTTCTATGCTAGCTAGTCATCAAGGTGGTATGTTTTCACGTAAACAAGAGTTAACATGGTTGGATAGTCCTCAGAGAAGAAAGGTTAGCCCTTTTAGAAATTCCTTTTTTGGAATGATTGCAGCTGCTAATCGAGATAAAATGGGTTCCCCTTCATCTCAAAGCAGTCAAACTACAACTACTACACCAAGTAGGACTGAATTACCAATTAGAGTAATGCTTAGTTGTCAAGAAAAAAGTGAGCATCCTAAAAGGCTTGTTTTTCTACCAAAGTCCCTTCAAGAGTTGCTAGATGTTGGTGCTAAAAAGTTTGACTTTTCTCCCACTAAAATCTTGACTGAAGATGGAGCTGAAGTTGAAGACATAAACTTGATAAGAGAGGGTGATCATCTTATTCTTGCTTGA 2667 0.3761 MKMFGIKSFGRKNDKQKQTKDDSSSQYSLTGFIPSLGAATVYGSKRQELRRYIISPSNRHYRQWCKFLMIWVFYTAWVCPFEFGFLEKSRGALAYADSIVNGFFFIDIVLTFFVAYVDKTTFLLVDDQWKIASRYLKSWFILDVLSIIPYEGAVYLLPTSLEMYGYFNILRLWRLRRASATFSRLEKDRNYNYFLVRCLKLTCVTLFALHCAACFFYFLATVRNDKKVTWLSLVSDADNLTMWDGYVTSLYWSIVTLSTVGYGDLHPVNTDEMIFDIFYMLFNFGLHAYLIGNMTNLVVHWTDRTKRYRDTVQAASNFSCRNRLPKRLQEQIFAHFHMKYKTNLEGLEQQEIMDSLPKAIKSSVAHYRFFERIQDVYLFNGVSSDLRFQLVTELKAEFFPPKEDVVLQNESPTDFYIMVVGAAASFICIPLYDIMKNLISIRLTKYVCKLYQTFKEATTGDVFGEIGVLSYRPQPYTVRTKRLSQILRLSRSTFLTLVHNNVEDGTIIMNNFLQHVQNLKYPMIDGVQAEIESMLSKGKMDLPISLIYAANKPDDMLLHQLLKKGSDPNEIDNKTGRTALHIAASKGNNHCAVLLLEFGADPNIQDFEGDIPLWEAIKGGHESMIKLLMDNGADISSANVASLACFAVEKNNIQLLKDIVKYGGDIVTKSTNDGTTALHTAVCDGNVEIVKFLVEQGGDIDKPDGFGWSSRAYANQQCHEEIQNMFKEIEQDNTIPYEKPNNNGGPFIEKGQREPSMLASHQGGMFSRKQELTWLDSPQRRKVSPFRNSFFGMIAAANRDKMGSPSSQSSQTTTTTPSRTELPIRVMLSCQEKSEHPKRLVFLPKSLQELLDVGAKKFDFSPTKILTEDGAEVEDINLIREGDHLILA 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00649 888 Gene3D Helix hairpin bin 303 367 - -
Mepo4g00649 888 ProSiteProfiles KHA domain profile. 825 888 IPR021789 -
Mepo4g00649 888 ProSiteProfiles Ankyrin repeat region circular profile. 673 704 - -
Mepo4g00649 888 SUPERFAMILY cAMP-binding domain-like 303 516 IPR018490 -
Mepo4g00649 888 SUPERFAMILY Voltage-gated potassium channels 56 299 - -
Mepo4g00649 888 SUPERFAMILY Ankyrin repeat 545 729 IPR036770 -
Mepo4g00649 888 Gene3D - 543 728 IPR036770 -
Mepo4g00649 888 PRINTS Ankyrin repeat signature 624 638 IPR002110 GO:0005515
Mepo4g00649 888 PRINTS Ankyrin repeat signature 576 591 IPR002110 GO:0005515
Mepo4g00649 888 CDD CAP_ED 378 509 IPR000595 -
Mepo4g00649 888 MobiDBLite consensus disorder prediction 801 821 - -
Mepo4g00649 888 FunFam Potassium channel KAT3 63 300 - -
Mepo4g00649 888 Gene3D Jelly Rolls 368 520 IPR014710 -
Mepo4g00649 888 Pfam Ankyrin repeats (3 copies) 546 637 IPR002110 GO:0005515
Mepo4g00649 888 Pfam Ankyrin repeats (3 copies) 646 703 IPR002110 GO:0005515
Mepo4g00649 888 Pfam KHA, dimerisation domain of potassium ion channel 825 887 IPR021789 -
Mepo4g00649 888 ProSiteProfiles Ankyrin repeat profile. 673 705 IPR002110 GO:0005515
Mepo4g00649 888 ProSiteProfiles Ankyrin repeat region circular profile. 608 639 - -
Mepo4g00649 888 ProSiteProfiles Ankyrin repeat profile. 575 607 IPR002110 GO:0005515
Mepo4g00649 888 PANTHER POTASSIUM CHANNEL AKT1 24 887 IPR045319 GO:0005249|GO:0006813
Mepo4g00649 888 PRINTS EAG/ELK/ERG potassium channel family signature 290 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g00649 888 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g00649 888 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g00649 888 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g00649 888 PRINTS EAG/ELK/ERG potassium channel family signature 246 263 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g00649 888 PRINTS EAG/ELK/ERG potassium channel family signature 272 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g00649 888 MobiDBLite consensus disorder prediction 799 821 - -
Mepo4g00649 888 FunFam Potassium channel KAT2 368 520 - -
Mepo4g00649 888 ProSiteProfiles cAMP/cGMP binding motif profile. 378 515 IPR000595 -
Mepo4g00649 888 ProSiteProfiles Ankyrin repeat region circular profile. 575 606 - -
Mepo4g00649 888 SMART cnmp_10 378 513 IPR000595 -
Mepo4g00649 888 MobiDBLite consensus disorder prediction 1 26 - -
Mepo4g00649 888 MobiDBLite consensus disorder prediction 7 21 - -
Mepo4g00649 888 Pfam Ion transport protein 63 305 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mepo4g00649 888 ProSiteProfiles Ankyrin repeat profile. 608 640 IPR002110 GO:0005515
Mepo4g00649 888 Gene3D - 62 299 - -
Mepo4g00649 888 Pfam Cyclic nucleotide-binding domain 399 500 IPR000595 -
Mepo4g00649 888 SMART ANK_2a 639 668 IPR002110 GO:0005515
Mepo4g00649 888 SMART ANK_2a 575 604 IPR002110 GO:0005515
Mepo4g00649 888 SMART ANK_2a 673 702 IPR002110 GO:0005515
Mepo4g00649 888 SMART ANK_2a 541 570 IPR002110 GO:0005515
Mepo4g00649 888 SMART ANK_2a 608 637 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00649 Mepo-Chr4 8821988 8827932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00649 19 888 Ion Channels AT2G25600 52.397 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00649 K21867 - gmx:100809960 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00649 4 8821988 8827932 Mepo4g00649 4 8821988 8827932 ECH
Mepo4g00649 4 8821988 8827932 Mepo3g07460 3 87962415 87967907 PCT