Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00645 ATGGATTCTCCAGAAGCTTCTAAGATCAATAACATTTCTTCTTCTCTCTCCACTATCAATGCCGCCACAAACAATCCTTCTGATCAATCCCCTCAAGTTCAAGAATCTCCCTTTTTGAGATTTGTCAACACTCTATCTCCAATAAAGCCTGTCAAGGCTTCTCATGCCACACATGGGTTTCTCGGACTCAATTCTCCACCTCTCGTATTCAAATCACCGCGTATCAGTGCTCCCCACCGTGAAACACAATATTCGGAAAGGCTTGAAGGTACCCATTTATCAGATCCAGAAACATCTCAATGTAACGTAGGAGACAACAGTCTTGGTGAAGCTCGTGGTGATTTGAAGAAATTGAATTCTCAGCAGCCACTGCCAGATGTGTTTACAACAGTTGCTCAAAAGGCTTTTGACCTCAAGAATGACGCGAATACCCAAAGCTGCAGTCCTCCAGCATCTGTCGATGAATATTTGGCTGATCCCGTGGATGATCAAATGTATCCAGTCAACCCAGAAATGGAACAATCTACTGATGCGGTTGGGTCATCATCACTAACTGAGTCGGAGAAAGTTATATTAAAATTTGATACGAGTGACGGTCGTAGTAACATAGCAGAAGAACTTTTGCCTTTGTTGGAGGAATCTAATATGGTTCATCAAGAAAGGACAGAATATGTTGAAAATCCTGCAACAACAGAAGGGGAGAAAAATGGTGCTGAATTGGTTTCTCAAGAGCACTTAGGTTCGAGTTCAGGTGCAGATGTTTTTGATAAACAATATTGCCATGATTCACTTCCCCAGTGTGCAGGAAATGATCAACGGCATCATAGTGATTGTGCACCTCAATTGATGCATGATCCTATCCAGGTTATTAAAGAATTTGAAAATTGCAGTGAGATGGTGTCATCCTCACAAGTAAATTCGGAGAACATCCCACAAGATGGTTCTGAGGCTAGTCTAAAGTATCATGGCATTCGTAGACGCTGCCTACAATTTGGGGAAGCTTCTTCCATTGTTCTTGGCAGTAATAAGTCTCATGTGAAATTGAATACAACTTCAAGCAACACGAAAATGGTTTCTGTGACAGTTTCCAAGCCACCAGGCATTGGGTTGCATTTAAATAGCATTATAAATGCAATGCCACCTAGTTGTGCTTCAACTACAGGTGTGGGATTATCAGATGGTATACAGGGGTCCAAATCTTCTATAAGTTTGCATATAGTGGAAAACGTGGCAAGATCCTCAACTCCGTCCAATATGGATGGTCAATCTTTTATTGATACTAAGAATGAGAGCCATGAAACTGATGCTTCAGTAGTTGCAGATTCTTTCATTTCCGAGTCTCCTATCTTGACAGAATCTATCGACCTATATCCGGCAAATGCACCTGATAAGAGGAGGGTACGCCCTACAGATGCTGAGGAATTCAACCATCCTAGCACGTCCAGGAAAAAGAAGAAAACAAGTACTGATGATGCCAGTGGACCTAAGACGTGCAACTGTAAGAAGAGTAAATGTTTGAAACTTTACTGTGATTGTTTTGGTGCTGGAATCTTCTGTGGCGACGGTTGTGCTTGCGAAGGCTGCGGTAATAGAGTAGAATTTCAGGATAAAGTTGTTGAAACAAAACAGCAAATTGAATCCCGTAATCCACAAGCATTTGCTCCCAAGATTGTACCATGTGCAGCTGATGTTCCACTGAATAATATGGAAGATGTGAATATGACAACACCGGCATCAGCTAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAAAGTGTACAAAAAAATACTGTGAATGTTTTCAGGCTAACGTTGGATGCTCGACTGGATGTCGATGTGATGGATGTATGAATGTCTTTGGCAAGAGAGAAGATTTTGTGGCAATGGAACATGCTTCTAGCAATGAAAGGGAGAGCAACATTGTTGAAGAAGGGTTGGATGACAAACTGCACAGAAGACAGAAAATTGTGACAATCAGGACAGACTTGTTACGACCAGCAAATCACCTCTCACCTGTAACACCATTGTTGCAATGCTCTGACCAAGGCAAGCAGGGTGCAAAGTCCAGACATTCCTCTGCAAAATTGACTAAATCTTCTAAAAAACCACGCAGCAGTCTTGCACATTCAGAGTCGAATGATTCTCAGAAGAATGCGCCTACACATTCTTCATCTACAGAAAATGAGTGGATAGATCTTCCACCATACCAGCTCTCCAATAGATGCGGTATTCGCCAGTTGTCTGGGGGCTCTCTTCGTTGGCGCGGTAGTTCACCGATTACCCCAAGCGCCAACTTAGATGATGAATCAGATGGGAAGCTCTTTGACATTCTAGAAGATGAAACACCTGATGTATTGAAGGAAGCTTCAACTCCCATCAAGTCTGTGAAAGCAAATTCTCCAATCCAAAAGAGAGTTTCTCCTCCACAGAGCCATTTACTTCGGATTGGGTCAAGCTCCTCAGGTGGCTTGAAAAGTGGCAGGAAATTTATATTGCAATCTGTTCCTTCATTCCCTCCGTTGACCCCTTGCGCTGATTCTAAAGTCCTTTGCAATGGCAGTGAGGATTCGGGTAACAGCACAGATAAAGTGACATAA 2598 0.4253 MDSPEASKINNISSSLSTINAATNNPSDQSPQVQESPFLRFVNTLSPIKPVKASHATHGFLGLNSPPLVFKSPRISAPHRETQYSERLEGTHLSDPETSQCNVGDNSLGEARGDLKKLNSQQPLPDVFTTVAQKAFDLKNDANTQSCSPPASVDEYLADPVDDQMYPVNPEMEQSTDAVGSSSLTESEKVILKFDTSDGRSNIAEELLPLLEESNMVHQERTEYVENPATTEGEKNGAELVSQEHLGSSSGADVFDKQYCHDSLPQCAGNDQRHHSDCAPQLMHDPIQVIKEFENCSEMVSSSQVNSENIPQDGSEASLKYHGIRRRCLQFGEASSIVLGSNKSHVKLNTTSSNTKMVSVTVSKPPGIGLHLNSIINAMPPSCASTTGVGLSDGIQGSKSSISLHIVENVARSSTPSNMDGQSFIDTKNESHETDASVVADSFISESPILTESIDLYPANAPDKRRVRPTDAEEFNHPSTSRKKKKTSTDDASGPKTCNCKKSKCLKLYCDCFGAGIFCGDGCACEGCGNRVEFQDKVVETKQQIESRNPQAFAPKIVPCAADVPLNNMEDVNMTTPASARHKRGCNCKRSKCTKKYCECFQANVGCSTGCRCDGCMNVFGKREDFVAMEHASSNERESNIVEEGLDDKLHRRQKIVTIRTDLLRPANHLSPVTPLLQCSDQGKQGAKSRHSSAKLTKSSKKPRSSLAHSESNDSQKNAPTHSSSTENEWIDLPPYQLSNRCGIRQLSGGSLRWRGSSPITPSANLDDESDGKLFDILEDETPDVLKEASTPIKSVKANSPIQKRVSPPQSHLLRIGSSSSGGLKSGRKFILQSVPSFPPLTPCADSKVLCNGSEDSGNSTDKVT 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00645 865 MobiDBLite consensus disorder prediction 459 491 - -
Mepo4g00645 865 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 584 618 IPR005172 -
Mepo4g00645 865 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 496 531 IPR005172 -
Mepo4g00645 865 MobiDBLite consensus disorder prediction 709 729 - -
Mepo4g00645 865 MobiDBLite consensus disorder prediction 674 729 - -
Mepo4g00645 865 MobiDBLite consensus disorder prediction 455 496 - -
Mepo4g00645 865 MobiDBLite consensus disorder prediction 798 825 - -
Mepo4g00645 865 MobiDBLite consensus disorder prediction 674 703 - -
Mepo4g00645 865 SMART CXC_2 581 622 IPR033467 -
Mepo4g00645 865 SMART CXC_2 493 534 IPR033467 -
Mepo4g00645 865 ProSiteProfiles CRC domain profile. 494 621 IPR005172 -
Mepo4g00645 865 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 848 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00645 Mepo-Chr4 8750694 8756396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00645 310 843 CPP Transcription Factor Family AT3G22780 33.333 1.31e-61 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mepo4g00645 TCR 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00645 K21776 - gmx:547664 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00645 4 8750694 8756396 Mepo4g00645 4 8750694 8756396 ECH
Mepo4g00645 4 8750694 8756396 Mepo3g06765 3 81399408 81401406 PCT