Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00637 ATGGAATCCCCTCCTTTCTGGCACATAGGAAGACTGACAACTTTAGACCATAATCACAACCACCATCCAAAAAGACCTGGAGCAACAAACCAGCCCGTCCCTTATTGGACTTTAAAGAACGACAACAACTTTGAGGATGACGACGACAAAGTAGGTTGGAAATCCGAGCTGATGCTTGACCGCCGGAGAGAAAAAGATTCAAAGGCATTAGGCAGCATGGTACAACGTAACAAGTTCAGAGGAGTTAGACAACGACAGTGGGGATCATGGGTCTCAGAAATTCGTCACCCTTTACTGAAGAGAAGGGTATGGCTAGGTACATTTGAGACAGCAGAAGCTGCAGCCAGAGCATATGATCAAGCAGCCATATTGATGAATGGAAAAAATGCCAAAACCAATTTCCCTATACCAAAGGATCAAACTGAAGATGCCAATGCCATAACTCCAAATTGTGATGATAATAATAACTCTTTCCTCTCTTCAAATGCTCTTTCTGATCTCCTTAAACAAAAGCTTACAAAATGTTGTCAAAAACAATCTCAATCGCTCACTTGTTTGAGGCTTGATGCTGATAATTCTCACATAGGAGTGTGGCAAAAAGGAGCAGGATCACATTCTGACTCTAATTGGATCTTAAGGGTGGAGCTTGGAAAAAAACATGAAGATAGTCATGAATCAAATTATGTGTCATCATCAGAAAGATCAGCACCTAATAGTACAATTGTTGGTGATTGTGCTGAGAAAAATGGGATAGAGTATGAAGAAGATATTGTTACCATGCAGATGATTGAAGAGCTACTTAATTGA 807 0.4052 MESPPFWHIGRLTTLDHNHNHHPKRPGATNQPVPYWTLKNDNNFEDDDDKVGWKSELMLDRRREKDSKALGSMVQRNKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGKNAKTNFPIPKDQTEDANAITPNCDDNNNSFLSSNALSDLLKQKLTKCCQKQSQSLTCLRLDADNSHIGVWQKGAGSHSDSNWILRVELGKKHEDSHESNYVSSSERSAPNSTIVGDCAEKNGIEYEEDIVTMQMIEELLN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00637 268 SMART rav1_2 78 141 IPR001471 GO:0003700|GO:0006355
Mepo4g00637 268 ProSiteProfiles AP2/ERF domain profile. 78 135 IPR001471 GO:0003700|GO:0006355
Mepo4g00637 268 FunFam Ethylene-responsive transcription factor 2 77 136 - -
Mepo4g00637 268 PRINTS Ethylene responsive element binding protein signature 101 117 IPR001471 GO:0003700|GO:0006355
Mepo4g00637 268 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Mepo4g00637 268 Pfam AP2 domain 78 127 IPR001471 GO:0003700|GO:0006355
Mepo4g00637 268 SUPERFAMILY DNA-binding domain 78 136 IPR016177 GO:0003677
Mepo4g00637 268 CDD AP2 78 136 IPR001471 GO:0003700|GO:0006355
Mepo4g00637 268 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 62 221 - -
Mepo4g00637 268 Gene3D AP2/ERF domain 77 136 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00637 Mepo-Chr4 8689745 8692929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00637 73 268 AP2-EREBP Transcription Factor Family AT5G25390 54.082 3.53e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g00637 AP2 3.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00637 - - gmx:100784305 224.942