Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00612 ATGGGAAAACCAGCTGGAAAAAAGAAGGAACATGAATCACCAAAATCCAACAACAACAAGAACAAAGGTTACGAACGTTCAACATCATTCGACGATGACACAGCCATGTTCATCAACATGTCACAAGAATTAAGAGAAGAAGGTAACAAACTTTTCTTCCAAAAAAAAGACAACGAAGGAGCTATGTTAAAGTACGAAAAAGCCCTCAAACTCTTACCCAAAAACCACATAGATGTTGCACATCTTCACACCAACATGGCCATGTGTTATATGCAATTGGGTCTTGGCGAATACCCTCGAGCCATTAACGAGTGCAATCTTGCTCTGCAAGTTTCGCCGAGGTATAGTAAAGCTCTTCTTAGAAGAGCTAAGTGTTACGAGGCGTTGAATCGGTTGGATTTGGCTATGAGAGATGTTAGAGTTGTTTTGAATGCTGAGCCGAATAATTCAACTGCGTTGGAGATTCTTGATAGTTTGAGGATTACTATGGAGGAGAAAGGGATTACTATTGATGAGACTGAGATTGCTTTGGCTGCTATTCAGCAAGTAGAGCCTCCTGCTGCGCGGTTTAGGAAAGTTGTTAGAGAGAAGATTAATAAGAAAAAGAAAGGGCATAAAGGAGAAGGCGAGGAAGAGAGGAAAAGTAAGAATGTTACTGAGAAGAAAGCCGCCAATGTTGGAAATGTTAATGTTAGTGTTAAGGTGAAGGGTAAAGATTCGAAGGATAAGGTTACGGATAAGGATAAGGGTAGTAAGGAAGTTGTTAAGGAAGATAAAGCGGTTACTAGGACTGTGAAGTTGATATATGGAGAGGATATTAGGTGGGCACAGTTGCCGGTGAATTGTAGTATGAAGTTGGTGAGAGATGTGATAAGGGATAGGTTTCCGGGGTTAAAGGGTGTTCTTGTGAAGTATAAGGACAGGGAAGGTGATTTGGTTACTATTACTACTACTTCTGAGTTGAGGTTAGCTGAGGGTTGTCATGTGCTTGGTTCGATTCGGCTGTATATTACGCAGGTGGATTTTGATATGGAGCCGCGTTATGATGAAAAGTCAAGTAGTGGTGAGGTGAGAGGGGAGAATGGGGTTGGAGAAGGAGATAAGGGTGTTGGGGGTAATAGGATGATTACTGTGGAGGAATGGCTTGTTCAGTTTGCGAGGCTGTTTAAGAACCATGTTGGGTTTGATTCTGATTCGTATCTGGATATTCATGAGGTTGGGATGAAGATATATTCGGAGGCGATGGAGGATTCAGTGACGAATGATGGTGCTCAAGAGCTGTTTGATATTGCTGCGGATAAGTTTCAAGAGATGGCTGCTTTGGCTTTGTTTAATTGGGGGAATGTTCACTTGTCTAAGGCAAGGAGGCGAGTGCCTTTTCAGGAAGACGGGTTGAGAGAAGCGTCTCTCGAGCATGTTAAAGCTGGATATGAATGGGCTACGAAGGAGTACAAGGAAGCAGAAATGAGATACGAAGAATCTGTGAAAATCAAACCGGACTTCTACGAGGGACTCCTAGCTCTTGGGTATCAGCAGTTTGAGCAAGCAAAGTTATGCTGGTGTTATTTAATTGCAAACAATAAGAATATCGAAGTTGGTCCTTTTGAGGAGGTTCTGCAGCTCTATAACAAGGCAGAGGACAGCATGGAAAAAGGGATGTTGATGTGGGAGGAGATTGAGGAACAGCGTTTGAATGGACTCTCTAAGTTAGATAAATATAATGCACAGTTAGAGAAAATGGGCTTGCACGGTCTTTTCAGGGATGTTTCTTCTGAAGAAGCTGAAGAGCAGGCTTCAAAGATGAGGATACAAATATACCTTTTATGGGGCACCTTATTGTACGAGCGTTCTGTTGTGGAATTTAAGCTAGGACTACCAACTTGGGAGGAATGTTTGGAGGTCGCTGTTGAAAAGTTTGAACTAGCTGGAGCTTCTACAACCGACATTGGTGTCATGATAAAGAACCATTGTTCTAATGAAACAGCAATGGAAGGGTTCAAAATTGATGACATAGTGCAAGCATGGAATGAGATGTATGATGGGTGGCAGTTTGATGTTCCAACTTTCCGACTTGAACCATTGTTTCGTCGGCGTGTTCCAAGACTCCATTACATCCTGGAACAATTTTAA 2130 0.4225 MGKPAGKKKEHESPKSNNNKNKGYERSTSFDDDTAMFINMSQELREEGNKLFFQKKDNEGAMLKYEKALKLLPKNHIDVAHLHTNMAMCYMQLGLGEYPRAINECNLALQVSPRYSKALLRRAKCYEALNRLDLAMRDVRVVLNAEPNNSTALEILDSLRITMEEKGITIDETEIALAAIQQVEPPAARFRKVVREKINKKKKGHKGEGEEERKSKNVTEKKAANVGNVNVSVKVKGKDSKDKVTDKDKGSKEVVKEDKAVTRTVKLIYGEDIRWAQLPVNCSMKLVRDVIRDRFPGLKGVLVKYKDREGDLVTITTTSELRLAEGCHVLGSIRLYITQVDFDMEPRYDEKSSSGEVRGENGVGEGDKGVGGNRMITVEEWLVQFARLFKNHVGFDSDSYLDIHEVGMKIYSEAMEDSVTNDGAQELFDIAADKFQEMAALALFNWGNVHLSKARRRVPFQEDGLREASLEHVKAGYEWATKEYKEAEMRYEESVKIKPDFYEGLLALGYQQFEQAKLCWCYLIANNKNIEVGPFEEVLQLYNKAEDSMEKGMLMWEEIEEQRLNGLSKLDKYNAQLEKMGLHGLFRDVSSEEAEEQASKMRIQIYLLWGTLLYERSVVEFKLGLPTWEECLEVAVEKFELAGASTTDIGVMIKNHCSNETAMEGFKIDDIVQAWNEMYDGWQFDVPTFRLEPLFRRRVPRLHYILEQF 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00612 709 MobiDBLite consensus disorder prediction 203 220 - -
Mepo4g00612 709 Pfam PB1 domain 262 338 IPR000270 GO:0005515
Mepo4g00612 709 Gene3D Tetratricopeptide repeat domain 29 168 IPR011990 GO:0005515
Mepo4g00612 709 CDD PB1 264 337 - -
Mepo4g00612 709 MobiDBLite consensus disorder prediction 348 369 - -
Mepo4g00612 709 SMART tpr_5 116 149 IPR019734 GO:0005515
Mepo4g00612 709 SMART tpr_5 468 501 IPR019734 GO:0005515
Mepo4g00612 709 SMART tpr_5 80 115 IPR019734 GO:0005515
Mepo4g00612 709 SMART tpr_5 41 75 IPR019734 GO:0005515
Mepo4g00612 709 MobiDBLite consensus disorder prediction 198 223 - -
Mepo4g00612 709 SMART PB1_new 262 340 IPR000270 GO:0005515
Mepo4g00612 709 ProSiteProfiles PB1 domain profile. 262 340 IPR000270 GO:0005515
Mepo4g00612 709 SUPERFAMILY CAD & PB1 domains 261 346 - -
Mepo4g00612 709 Gene3D - 255 339 - -
Mepo4g00612 709 PANTHER PROTEIN CLMP1 1 707 IPR044517 -
Mepo4g00612 709 MobiDBLite consensus disorder prediction 1 28 - -
Mepo4g00612 709 SUPERFAMILY TPR-like 39 160 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00612 Mepo-Chr4 8321121 8325629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00612 29 149 Calmodulin-binding Proteins AT3G25230 32.308 8.39e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00612 K26538 - fve:101302806 905.59