Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00596 ATGTTCCATCTATCTTTACATGTTTTCATAGAAACAATGAAAATGAAGCTTCTTTTTATGCTCTTCCTTATTCTTCACAAACCCATTTGGATTTTTGCCTCTGTAGTTGACCCTCTTGTTCCCTCTCCTCAAATTTCACCAATTCTTACATCAATCACTGTAGCTGCTTCCTCTCCAGGTATTCATGTGGGGGATGAACATCAAAATATGGATTCACACAAGAAAAAGGTAATGGCTTTTGTGGCAGCTAGCACTGGACTTGGTGCTATCATTTTGTGTTTGTTAAGCTTCTGGATTTTTTACATCAAGTATTCTTCAAAATCCAAAAAGAAAAACCTTCAAAACTCAGATGGTGAAAAAGGGCTTGGTTCAGTTCCATTTTTGAGTAAATTCAGTTCTGTGAAGATGGTTGGTAAGAAAGGGAGTGTTCCAATCATTGACTATAAGCAATTAGAAAAAGCCACTGGAAATTTCAAGGAAAGTAACATCATAGGTGAGGGTGGTTTTGGATGTGTTTACAAGGCTAGGTTGGATGATAATTTGGAAGTTGCTATCAAGAGGTTGAACTGTGAATGTCAATATGCTGAGAGAGAATTTGAGAATGAGGTGGATTTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTCTACTGGGTTGTAGCAGTAATGAGGATTCAAGGTTTATTGTCTATGAGTTGATGCAAAATGGATCATTGGAAACTCAATTACATGGACCATCTCATGGCTCTGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACAGCTAGAGGTTTAAAATATCTGCATGAGCACTGCTACCCTGCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCAATAACTGATGGGTCCCAAAACAAGAATAACATCAAGCTTTCAGGCACATTGGGGTACGTTGCTCCAGAGTATCTTTTAGATGGTAAATTGACAGATAAAAGTGATGTGTATGCTTTTGGAGTTGTGCTTCTTGAGCTTCTTTTAGGAAGAAAGCCTGTGGAAAAACTCACACCATCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGATCCAAGCTTCCAAACATTGTGGATAATGTGATTAAGAATACAATGGATCCCAAGCACTTATACCAGGTTGCTGCAGTGGCTGTATTATGTGTGCAACCAGAGCCGTGTTACCGCCCTTTGATTGCAGATGTTCTACACTCCCTCATCCCTCTTGTACCTGTTGAGCTTGGAGGAACACTCAGAGTTTCACAAGTGACACAGCAACCTGAGAATTCTAATTAA 1362 0.3906 MFHLSLHVFIETMKMKLLFMLFLILHKPIWIFASVVDPLVPSPQISPILTSITVAASSPGIHVGDEHQNMDSHKKKVMAFVAASTGLGAIILCLLSFWIFYIKYSSKSKKKNLQNSDGEKGLGSVPFLSKFSSVKMVGKKGSVPIIDYKQLEKATGNFKESNIIGEGGFGCVYKARLDDNLEVAIKRLNCECQYAEREFENEVDLLSKIQHPNVISLLGCSSNEDSRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDTARGLKYLHEHCYPAVIHRDLKSSNILLDANFNAKLSDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLTPSQCQSIVTWAMPQLTDRSKLPNIVDNVIKNTMDPKHLYQVAAVAVLCVQPEPCYRPLIADVLHSLIPLVPVELGGTLRVSQVTQQPENSN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00596 453 ProSiteProfiles Protein kinase domain profile. 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00596 453 SUPERFAMILY Protein kinase-like (PK-like) 137 428 IPR011009 -
Mepo4g00596 453 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Mepo4g00596 453 PANTHER OS01G0750732 PROTEIN 39 432 - -
Mepo4g00596 453 FunFam Protein kinase superfamily protein 125 233 - -
Mepo4g00596 453 SMART serkin_6 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00596 453 Gene3D Transferase(Phosphotransferase) domain 1 234 433 - -
Mepo4g00596 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Mepo4g00596 453 Pfam Protein tyrosine and serine/threonine kinase 161 396 IPR001245 GO:0004672|GO:0006468
Mepo4g00596 453 Gene3D Phosphorylase Kinase; domain 1 127 233 - -
Mepo4g00596 453 FunFam probable receptor-like protein kinase At1g80640 234 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00596 Mepo-Chr4 8178701 8183259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00596 31 374 Receptor kinase-like Gene Family AT1G80640 46.667 3.35e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Mepo4g00596 Pkinase 8.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00596 - - gmx:100812044 702.59