Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00576 ATGAATGATCAGTTTCCCATTGGAATGCGAGTTCTTGCCGTCGATGATGATAGAACATGTCTCAAGATTTTGGAGAAACTTCTCCAAAGGTGTCAATACCATGTAACCACTGCTCAAAACGCGATCACTGCGTTGAACTTGTTGAGAGAAAACAAAAGCGATTTTGACCTAGTAATCAGCAATGTTCATATGCCAGACATGGATGGATTTAAGCTTCTTGAGCTTGTTGGACTTGAGATGGACCTACCTGTCATAATGTTTTCTGCGAATGATGATCCAAATCTGGTGATGAAAGGAATTGAACATGGTGCTTGTGATTATCTGCTGAAACCTGTTAGACTGAAAGAGGTACAGATCATTTGGCAGCATGTAATCAGGAAGAAGAAAACTAGCAAAAGAAGCAATCATGACGCGCCTAATTCTGATAGTGGAAACGGGAAAGATTCGGCTGGGACAGGAAATTCTGATCAAAATGAAAAGCCATCTAGAAAAAGGAAGGATACGAATAAAGATGACAGTGAGGAAGAAAATGAGGATGATTATGAAAATGATGATCAAACTGCGCAGAAGAAGCCTCGAACTGTTTGGTCCGCTGATTTACACCGCAAGTTTGTTGCTGCTGTTAATCAATTAGGCGTTGACAAGGCTGTACCGAAAAAGATTCTTGAACTGATGAATGTTGAAAATCTGACAAGGGAGAAGGTGGCCAGCCATCTCCAGAAGTATAGACTCTATCTAAAAAGAATTAGTTGTGCGGAAGACAAACAAGATCATATGGCAGCAACCTTAGCTAGTAGTTCAGATGCATCCTATTTAAGAAGTGGAGTTGGAGGACATTTGCATACATCGAATGGCTCTACACTGTTTCACAACCATAATAATCATTTCAGATCATTTCCATCAGGTGGCGGTATCATTAGTAGATTCAACACACCTAATACTGAGAATATGTATGGATTGCATTCTGCCGGAACTCTTCAGCCGAGTCAGACACACAATTTAAACAACTCAACAGATGATCAGCTAAAGTTCCAATCGGCCCTAACTCGTGGCACTCCAAATGATGTTCAAAGAGGTATCTCTATTAGTCCTATCCAAAACATGACCAATAACCTCCCAAATTTCAGTTGCACAAACAATCCCTTGATGTTTGAAGGAAATCCTCAAGACAAACAAGTTGGTGAAGGATACAAAAGTTTAGCATCTCAGAATTCACAGTGTTTCCCTTTACTTGAAAACAGAAGGTGCAATGGTATTTGGTCAAGCACAATGCAACTACCTGGAACAAACTCTTATCTTCCAAGAGAATCTTTTAACCATGCTGCTATGCCTCATGTGTTATTTCAAGGTTGGGATAATAACAATAATCATGATGGAAGTTACCATTCTTCTAATGTGATTGGCAGTTCAATAGGCTCTTCTATGGTTCCTGGTATGAATGTTGTTGAACAAGAAGGAAACTTGGACTACAATTATGGTGATTCGGTACAATGA 1494 0.3969 MNDQFPIGMRVLAVDDDRTCLKILEKLLQRCQYHVTTAQNAITALNLLRENKSDFDLVISNVHMPDMDGFKLLELVGLEMDLPVIMFSANDDPNLVMKGIEHGACDYLLKPVRLKEVQIIWQHVIRKKKTSKRSNHDAPNSDSGNGKDSAGTGNSDQNEKPSRKRKDTNKDDSEEENEDDYENDDQTAQKKPRTVWSADLHRKFVAAVNQLGVDKAVPKKILELMNVENLTREKVASHLQKYRLYLKRISCAEDKQDHMAATLASSSDASYLRSGVGGHLHTSNGSTLFHNHNNHFRSFPSGGGIISRFNTPNTENMYGLHSAGTLQPSQTHNLNNSTDDQLKFQSALTRGTPNDVQRGISISPIQNMTNNLPNFSCTNNPLMFEGNPQDKQVGEGYKSLASQNSQCFPLLENRRCNGIWSSTMQLPGTNSYLPRESFNHAAMPHVLFQGWDNNNNHDGSYHSSNVIGSSIGSSMVPGMNVVEQEGNLDYNYGDSVQ 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00576 497 MobiDBLite consensus disorder prediction 158 172 - -
Mepo4g00576 497 SUPERFAMILY Homeodomain-like 189 248 IPR009057 -
Mepo4g00576 497 Gene3D - 8 141 - -
Mepo4g00576 497 Pfam Myb-like DNA-binding domain 194 243 IPR001005 -
Mepo4g00576 497 CDD REC_typeB_ARR-like 11 125 - -
Mepo4g00576 497 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 247 IPR017930 -
Mepo4g00576 497 FunFam Two-component response regulator 187 250 - -
Mepo4g00576 497 PIRSF RR_ARR_type-B 1 489 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mepo4g00576 497 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 330 IPR045279 GO:0009736
Mepo4g00576 497 NCBIfam myb-like DNA-binding domain, SHAQKYF class 191 244 IPR006447 GO:0003677
Mepo4g00576 497 ProSiteProfiles Response regulatory domain profile. 10 125 IPR001789 GO:0000160
Mepo4g00576 497 Pfam Response regulator receiver domain 11 117 IPR001789 GO:0000160
Mepo4g00576 497 SUPERFAMILY CheY-like 8 132 IPR011006 -
Mepo4g00576 497 Gene3D - 187 250 - -
Mepo4g00576 497 MobiDBLite consensus disorder prediction 137 157 - -
Mepo4g00576 497 SMART REC_2 9 121 IPR001789 GO:0000160
Mepo4g00576 497 MobiDBLite consensus disorder prediction 128 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00576 Mepo-Chr4 8042548 8045255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00576 3 331 Response Regulator Gene Family AT2G25180 57.485 2.15e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo4g00576 Response_reg 2.7e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00576 - K14491 tpra:123915626 670.233