Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00575 ATGAATGATCAATTTCCTATTGGAATGCGTGTTCTTGCCGTCGATGATGATAGAACATGTCTCAAGATTTTGGAGAGACTTCTCCAAAGGTGTCAATACCATGTAACCACTGCTCAAAGTGCACTAACAGCACTGAACTTGTTGAGAGAAAATAAAAGCAATTTTGATCTAGTAATCAGCAATGTTCATATGCCAGACATGGATGGGTTTAAGCTTCTTGAGCTTGTTGGACTTGAGATGGACCTACCTGTCATAATGTTTTCTGCGAATGACGATCCAAAGATGGTGATGAAAGGAATTGATCATGGTGCTTGTGATTATCTGCTGAAACCTGTTACATTGAAGGAGGTACAAATGATTTGGCAACATGTAGTCAGGAAGAAGAAAACTAGCAAAAGAAGCAATCTTGACGCGCCTAATTCTGATAGTGGAAATGGAATCGATTCAGCTCGGACAGGAAATTTCGATCAAAATGAAAAGCCATCTAGAAAAAGGAAGGAGAAGAACGAAGATGATGATGAGGATGAGAATGAGGATGATCGTGACAATGATGATTCGATGGCACAGAAGAAGCCTCGAGTTGTTTGGTCTGCTGACTTACACCGCAAGTTTCTTGCTGCTGTTAAACAATTAGGCTTTGAAAAGGCTGTGCCGAAAAAGATCCTTGACTTGATGGATGATGAAAACCTTACAAGGGAGAATGTGGCCAGCCATCTCCAGAAATACAGACTCTATCTGAAAAAACAAGCTAGTATGGCAGAAGATTTGGGTAATGATTCTGATAAATCCTATTCAAGAATGGGTTATATCAGTGGAGTTGGTGCACATGTGCAGCCATTTATTGACCCTAGACAGTTTCATAATAATAACAGTGCTTTCAGATCCTTTCCATCTAGTGGTATGAGTAGTAGATTGAACACTCCTGCTAGTAGTGTCAATATGCATGGATTTCCTGCACATAATTTGAACAACTCAACAGGGGATCATCTTAGGTTTCAATCGGCCATAGCTCGTTCCAATCTGAATGATGTTCAAAGAATGCCGTTTCCTTCTGTAGACTCTCAGCATTCACAGTTTTCTCATCCTTTACTTGAAAAAAGAAGGTGCAATGACATTTGGTCAAGCCCTATGCTGCAATTACCTGAAACAAACTCTTACCTTCCAAAAGAAGGTTTTGTCCATGCTGCTGCTATGCCTCCTACATATAACATGAACTCACAAGGTATTATTTTTAACAGTTCTAATAATGTGCCATTTCAAGGATGGGATAATAACCATAACAATCATGATGGAAGTTACCATCCTTCTCATGTGGTTGGTAATTCAGTAGGCCCTTCTATGATTCATGTTCTGAATGCTATTGAACCAGAAGGAAACATGGACAATAATTATTGTGATCGTTTTGCGGAGTTACATGAAGTTCCGTCATTGAAACCACATGAGGTATATATGATGAATAACCAGGTGAAGGCTGGAAATAGCCACGTCTCTAATGAGGTTGATTCGCTTGAGGACGTCATAAGAGTCATGATCAAACCGAAACAATTATATGCAAATTTCTCTGGTGGGACATCAATGCCGCGGCAAGATTAG 1593 0.398 MNDQFPIGMRVLAVDDDRTCLKILERLLQRCQYHVTTAQSALTALNLLRENKSNFDLVISNVHMPDMDGFKLLELVGLEMDLPVIMFSANDDPKMVMKGIDHGACDYLLKPVTLKEVQMIWQHVVRKKKTSKRSNLDAPNSDSGNGIDSARTGNFDQNEKPSRKRKEKNEDDDEDENEDDRDNDDSMAQKKPRVVWSADLHRKFLAAVKQLGFEKAVPKKILDLMDDENLTRENVASHLQKYRLYLKKQASMAEDLGNDSDKSYSRMGYISGVGAHVQPFIDPRQFHNNNSAFRSFPSSGMSSRLNTPASSVNMHGFPAHNLNNSTGDHLRFQSAIARSNLNDVQRMPFPSVDSQHSQFSHPLLEKRRCNDIWSSPMLQLPETNSYLPKEGFVHAAAMPPTYNMNSQGIIFNSSNNVPFQGWDNNHNNHDGSYHPSHVVGNSVGPSMIHVLNAIEPEGNMDNNYCDRFAELHEVPSLKPHEVYMMNNQVKAGNSHVSNEVDSLEDVIRVMIKPKQLYANFSGGTSMPRQD 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00575 530 MobiDBLite consensus disorder prediction 136 156 - -
Mepo4g00575 530 Pfam Myb-like DNA-binding domain 193 243 IPR001005 -
Mepo4g00575 530 MobiDBLite consensus disorder prediction 157 171 - -
Mepo4g00575 530 Gene3D - 8 140 - -
Mepo4g00575 530 SUPERFAMILY Homeodomain-like 188 248 IPR009057 -
Mepo4g00575 530 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 322 IPR045279 GO:0009736
Mepo4g00575 530 NCBIfam myb-like DNA-binding domain, SHAQKYF class 191 244 IPR006447 GO:0003677
Mepo4g00575 530 CDD REC_typeB_ARR-like 11 125 - -
Mepo4g00575 530 Pfam Response regulator receiver domain 11 117 IPR001789 GO:0000160
Mepo4g00575 530 SMART REC_2 9 121 IPR001789 GO:0000160
Mepo4g00575 530 PIRSF RR_ARR_type-B 1 520 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mepo4g00575 530 Gene3D - 187 249 - -
Mepo4g00575 530 ProSiteProfiles Response regulatory domain profile. 10 125 IPR001789 GO:0000160
Mepo4g00575 530 SUPERFAMILY CheY-like 8 132 IPR011006 -
Mepo4g00575 530 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 247 IPR017930 -
Mepo4g00575 530 FunFam Two-component response regulator 187 250 - -
Mepo4g00575 530 MobiDBLite consensus disorder prediction 130 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00575 Mepo-Chr4 8021957 8025025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00575 3 310 Response Regulator Gene Family AT2G25180 58.013 4.06e-109 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo4g00575 Response_reg 8.4e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00575 - K14491 mtr:25481958 1013.83