Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00555 ATGGGAACAACTCTCAGCATTCCTAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACAATCTTAGATATGGTTTATCATCTATGCAAGGTTGGCGTGCAACAATGGAAGATGCACATGCCGCGCATCTTGATGTGGATTCATCCACTTCGTTTTTCGGTGTATATGATGGTCATGGAGGTAAGGCGGTTGCAAAGTTTTGTGCCAAGCACCTTCACCAACAGGTGCTCAAGAGTGAAGAATACATAGCTGGAGATGTTGGAACATCTCTTCAGAAAGCATTTTTCAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTCTTAGGTGATAAGGTAAAAGGGTTCAATGGAATGATTGAAGGATTGATTCGGTCTCCCAGAAGCAATCATAATAATGACCAAAGTGATGATTGGGCCTTTGAGAAGGGGCCTCATTCAGACTTTGATGGACCAACTTCAGGAAGCACTGCTTGTGTTGCAATCATTAGAAACAACCTACTTTTTGTTGCGAATGCAGGTGATTCACGCTGCGTAATATCTAGGAATGGTCAGGCATACAATTTATCTAGAGATCACAAACCTGAGCTTGTGATTGAGAAGGAAAGAATCTATAAAGCTGGTGGTTTTATTCATGCAGGACGAATTAATGGGAGTTTAAATCTTGCAAGAGCTATAGGTGACGTGGACTTCAAAAATAATAGATTTCTTTCTGCTGAAAAACAAGTTGTGACCGCCAATCCAGACATAAACATTGTCGACCTTCATGACGAAGATGAGTTTATAGTGATAGCTTGTGATGGCATATGGGATTGCCTATCAAGCCAACAATTGGTAGATTTTGTACGTCAAGAACTTCTCTTGGAAACCAAACTCTCTGATGTTTGTGAAAGAGTGCTAGACCGGTGTTTGGCACCATCTTTGGCTGTTGGTGATGGATGTGATAACATGACAATGATCTTGGTGCAGTTCAAAAAACCAGTGCAGACTAGTGCACCGGCTCAAGAACAATCATCTTCAAATGAACAAGATGCATCTGAACCAGCTTTGGAGAACAGTTGA 1077 0.4141 MGTTLSIPKTEKFSEDGENDNLRYGLSSMQGWRATMEDAHAAHLDVDSSTSFFGVYDGHGGKAVAKFCAKHLHQQVLKSEEYIAGDVGTSLQKAFFRMDEMMRGQRGWRELAVLGDKVKGFNGMIEGLIRSPRSNHNNDQSDDWAFEKGPHSDFDGPTSGSTACVAIIRNNLLFVANAGDSRCVISRNGQAYNLSRDHKPELVIEKERIYKAGGFIHAGRINGSLNLARAIGDVDFKNNRFLSAEKQVVTANPDINIVDLHDEDEFIVIACDGIWDCLSSQQLVDFVRQELLLETKLSDVCERVLDRCLAPSLAVGDGCDNMTMILVQFKKPVQTSAPAQEQSSSNEQDASEPALENS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00555 358 Gene3D - 1 330 IPR036457 -
Mepo4g00555 358 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Mepo4g00555 358 Pfam Protein phosphatase 2C 138 311 IPR001932 -
Mepo4g00555 358 CDD PP2Cc 23 329 IPR001932 -
Mepo4g00555 358 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Mepo4g00555 358 SMART PP2C_SIG_2 28 329 IPR001932 -
Mepo4g00555 358 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Mepo4g00555 358 SMART PP2C_4 13 327 IPR001932 -
Mepo4g00555 358 PANTHER PROTEIN PHOSPHATASE 2C 21 328 IPR015655 GO:0004722|GO:0006470
Mepo4g00555 358 MobiDBLite consensus disorder prediction 335 358 - -
Mepo4g00555 358 SUPERFAMILY PP2C-like 3 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00555 Mepo-Chr4 7807978 7813705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00555 1 332 PP2C-type Phosphatase Gene Family AT2G25070 75.000 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00555 K17499 - gmx:100793667 581.637