Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00545 ATGGAAATGGGGTCTACTGCGATATTCATGGATCTCGAGAACTGTTCCATTCCTACACAACTAAGAAGTTATGAATTGATTAAACAAAGAATCAGTGCTTCTCTTCGACTAGGCGGTATACGAGTAGAAGGCGGAATCACTGTGAGAGCATTTGGAAACGTTAATAAGATAAGCGCTGATGTTCGACGCCAATTCAAAGCTGCACGTATTGACTTGGTTGATGCTCCTTCCGGCGGAGGTGTAAAAAGAAATGGGTCTGATGTTATGCTTATTAACAGCATGCATTCCTGGTCGCGTGAAAATCCAAACGGAAATATCCTCCTTATCGCGGATGATAGTGATTATGTCGAAACCTTGAAGTTTATGGAAGAAGGTGGGCATAAAGTCATGATCGCGGGGGGATGTGATGCCTCAGAACTGCTGATGGAACACGGACAAGTATGGTGGAACTGGCCCAACATAGTCCTTTCAGACTCTGGCAGTTCTCCCCTATACTATCGAAACCCGGATGAGTCAGACTCAAAAGAGAGATTGGGTCCCATAAATGTCGTTATTCGAATTTTGCAAATTTTACAGCTCGAACATGTATTGCCTACACTTGAAAATATCAAAGAATGCTATGATGCTCGTCCTGAGCTCTATTCCAGGAATTATATAAGTATTGATAATGCTTTGCAATGGGCATGTGAACACAAGAAAGTTACCATTGAGCGTATTCGAGTTGCCAGCCACGGCAATCTTAGTTTGTACAGATTAGTTGACAGCCACCTTGGAATTTGTTCAAACCCTAAGGTTGGGACCAATATTGATTATATACAAGTGTGGCCACTATTGCAAACTTTTTTGCTCAACAATATTGGTGGAGGAAATCGATTAGAACCAGGAAAATCCATGTTTGAGTTTGCTGGAATTCTCCAGAGGAAGTTCTTTAATGTCTGTAACTTTGGTGAAAAGCTTCTGATCGGTGAGATATTAACTGTAATCCATGTCATGCTGAAGCCTAAACTCAATGGTGGTTTAGATTGGATGGATAACCATTGTGCTGAGGAATGGGCTCCAAATTTCAAGATGCGGAATATTAGAAGATATAAAGAAGAAGACATTGTAGGGGGGTAG 1116 0.4149 MEMGSTAIFMDLENCSIPTQLRSYELIKQRISASLRLGGIRVEGGITVRAFGNVNKISADVRRQFKAARIDLVDAPSGGGVKRNGSDVMLINSMHSWSRENPNGNILLIADDSDYVETLKFMEEGGHKVMIAGGCDASELLMEHGQVWWNWPNIVLSDSGSSPLYYRNPDESDSKERLGPINVVIRILQILQLEHVLPTLENIKECYDARPELYSRNYISIDNALQWACEHKKVTIERIRVASHGNLSLYRLVDSHLGICSNPKVGTNIDYIQVWPLLQTFLLNNIGGGNRLEPGKSMFEFAGILQRKFFNVCNFGEKLLIGEILTVIHVMLKPKLNGGLDWMDNHCAEEWAPNFKMRNIRRYKEEDIVGG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00545 371 Gene3D - 2 148 - -
Mepo4g00545 371 PANTHER LIMKAIN B LKAP 5 207 IPR024768 GO:0005777|GO:0010468
Mepo4g00545 371 Pfam NYN domain 6 133 IPR021139 GO:0004540
Mepo4g00545 371 CDD PIN_limkain_b1_N_like 6 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00545 Mepo-Chr4 7723724 7727145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00545 4 164 C2H2 Transcription Factor Family AT5G61190 25.926 3.20e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00545 - - apan:127248790 77.7962