Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00536 ATGGCATTGTTCCGTAAGTTCTTCTATAAGAAACCACCTGATGGGCTTCTTGAAATCACTGAAAGGGTTTATGTCTTCGATTACTGCTTTACCACAGATGTTATGGACGAAGACGAATACAAAGTGTATATAGGAGGAATAATTAGGCAAATTCGTGAGCATTTCCCCGACGCTTCATTTATGGTGTTCAACATGAGGGAAGGAGAAAACCAAAGCCATATATCAAACATTTTGTGTGACTATGACATGACCGTGATGGACTATCCTAGACAGTACGAAGGTTGTCCATTACTTACCATGGAGATGATCCATCATTTCTTAAGATCAGGTGAAAATTGGCTACAACTCGGGAATCAAAATATCGTTTTGATGCATTGCGAACGAGGTGGGTGGCCGGTCTTGGCATTTATGCTGGCAGCACTATTGATTTATAGAAAAATGTATACAGGGGAGCAGAAAACACTTGATATGATATATAAGCAAGCGCCTCGGGAGCTTTTGCAGTTGATGTCACCATTGAATCCATTACCTTCACAATTGAGGTATCTTCAATACATATCAAGAAGAAATGTTGGTTCGGAATGGCCTCCTCTGGATAGAGCACTTACATTGGACTGTGTAATTATAAGACAAATTCCTAACATGGACGGAGAGGGTGGTTGTCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATTCCTGCGAATCGGAGTCCCAAAGTTCTCTTTTCTACTCCAAAAAAGAGCAAACTTGTTCGGCACTATAAACAGTCTGATTGTGAACTTGTTAAGATTGACATCCATTGTCATGTTCAAGGCGATGTTGTACTCGAGTGTATTAGTTTGGACAGTGATGTGGAACGTGAACAAATGATGTTCCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGCGATGAAATCGACATATTATGGAATACTAAAGATCACTTCCCTAAAACTTTTAGAGTAGAGGTTCTTTTCTCAGATATGGAGGCTTCTTCATCTTCTGTTATTTCAGTTGATCTTCCTCGTATCGAGGAGAAAGAAGGTCTACCTGTTGAAGCATTCGCTAAAGTTAAGGAAATTTTCAGCAATGTTGAGTGGCTCGATTCGAAGACAGATGTAGCAAATGTGCTCCAACAGATCACAGCATCAAATATGCTTCTAGAAAGATTGGACAGTGGAGCTTCTGCTTCAACTTGCACCTTGCTAAACGAGTCATTGTCCGGAAGATTAAAATTTGATTCAAAGTCACAAAGCCAAACAAACAGTCCCAAATCTTCTGTTCATGAGGAACGTTCCGTGTCTCCATTGCAATTGTCTGAGGATGTTCCTATGGATAAAATGATTAAACCAGTAAAAATAGAGGAACTGTCAGCAGAGAAAATCAAGACCCCTGCAAGTTTAGGTCCAGCGAGCAAACCTATTCTTTCATTTGATCTGTCAAAAGATTCAGATTCTACTAAAAAGGAGACTGAATCATCAGAACCAAAAAAGTCACTGGAAAATGATCCTGAATTTCCTGCTTCTACGGCTCAGGTGAAACAATCTATCCCCTTGATTGAACCATCAATAGATGCAGATTCTATGAAAATGAAGACTGGATCACTGGAATCTGACAAAAAGAATATTGAATCATTTGCATCAAAGAATATGGAATCATTAGCATCAAAGGCAGTATTGGAAAATAACACCATGTTTCCTGCATCTGAATCTAATACTAATGCAATTTCTATGAAAAATATTGGACTGTTAAGATCAAAAGTAAAGGAGATTGAGTCATTATTCTCCGAGGCACTGTTGGAAAAGGATCGCATAGTTAAATTTGAACCAAAGACACTGCTGGAAGTTGATACAAATAGTCCGAGATCTGCAGGTCAAGAGAAACTTTCAGTGTCCTCATTTGAATCAATTGGGGATGCTGCAATGGAAAAGAAGAAAGAAGCTTTACGTTTAACGGCATCACCAGAAAATAACATCAAGACTCCTGCACCAACAGATTCAAGTCCTACTGAAATGAAGATTGAATCATTAGAATTAAAGGGACCGGTGGAAAATGATACCAAGTTTCCTATGTCTCCAGCTCAAACGAAACAATCTATTCCTTTAACTGAACCATCCACAAAAGCTAATTCATTGGAAAAGATGGAGAAATTAGAGTCAAAGGAAAAGGATATTGAATTGTTAGAATCAAAGTCATTGTTGGAAAATGATACCAAGAAGGAGCAATCGGTTCCTCTAATTCAAACATCGAAGGATGCAAGTTCATTGAAAACGGTGACTGAGAAGTCAGAATCAACGGTGTTGTCAGAAACTGATATCAGGAGTCCAACATCCAAGGTCGATAATAAACAAATTAGTCCCTTAATTGAACCCTCCATTGATGCAAAATCAATTAAAAAGAAGATTGACCCTCAACAATTGCAGGTTTCACTTCAGCTACCAACCCAATCTAAAATAATTTCTCCACGGACACATCAAGCTATTCGACCTGCTTCTACTTCTGCTTCTTATTCTCCTACCTCCTTGCTAGGTTCGCCTGTAGCCATCTCAAGATATCAGAATTCACCATCAGCTCTCGGAATAACAACCGTGTTGCAAGATCATACACCAATGGATATCAAAGAAGAAGTCACTCATGCAGCGTCGGTATCTCCTCGTTCAGACTCAAAGGTGCCAAAGTCTGTAGAGCCTTGTTCTACAAGTATTCCTACAACATCATCATCACCGGAATTGCTTCCATCTTCGCCATTGAAGTCTTCAGACCCAAAGGTGCCAAAGTCTGTAGAGCTTTGTTCTACAAGCATTCCTACAACATCATCATCATTGGAATTGCTTCCATCTTTGCCATTGAAGTCTTCAGACTCAAAGGTGTCAAAGTCTGTAGAGCTTTGTTCTACAAGTATTCCTACAACATCATCATCACCGGAATTCCTTCCGTCTTCGCCGCTGAAGTCTTCAGACTCAAAGGCGCTAAAGTCTGTAGAGCCTTGTTCTACAAGTATTCCTACAGCATCATCACCACCAGAATTTCTTCCATCTTTGCCGTTGAAGTCTTCAGACTCAAAGGCGCTAAAGTCTGTAGAGCTTTGTTCTACAAGTATTCCTACAACATCATCACCGCCGGAATTGCTTCCTTCTTCGCCGTTGAAGACTTTAGACTCAAAGGCGCTAAAGTCTGTAGAGCCTTGTTCTACAAGTATTCCTACAACATTATCACCTGAATTGCTTTCATCTTCGCCGTTGAAGTCTTCATCAGTGGATCCTCTTGCTGCCATGGAAAAGACTTTTAAACCCATTATTCCTATTCCTCCACCTCCTCCTCAGCAAAGTGAAAACTCAATGCATGATACAAATCAGATATCATCATCTATTCCTCCTCCCCCTCCTCCTCCGTTCCTTCCTGAAACATCTTTTTCCACTGTAGAAAATTCATTAAAACATCCTCCTCCTCATCCACCACCTCCACCACCACCACCTCCATCTTCAACCGGACAAACATCGTCATCTTCAATACCTCCTCCTCTACAGAGTATGAACAACTCTGTTGCTATGTCTGGTCCTCCTCCTCCACCTCCACCACCAAGACAACCAGGCACCACACCTGGTTCCACTTCTACACCATTAGCGCCGCCACCACCTCCTCCACCTGGTTTTGCAATCCAAAATTCTCTGTCTAAAGGCCCTGCAAATATTCCACCCGTTCCCCCACCTCCTTCTCCTTCTGCCAATGGATTATCAAACTCTGCTGCCTCACCACAGTCTCGTGCAATTCCTGGACCACCTGGAACTGCACCTCCAATTCCTGGACCACCTGGGAATGTGCCTCCAATTCCTGGCCCACCTTCCGGTGCATTTGGCGCAAAGGGACGCGGATTACTACGTACTAATGCGAAAACTCAAACTAAAAGAAGCAATCTGAAACCTTACCATTGGTTAAAGTTAACAAGGGCCATGCATGGTAGCTTGTGGGCTGAGACACAGAAACTTGATGAAGCTTCTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGACTCTTTTCTCTGCAAATAATCCCAGTTCTAATCATGAAAAAGGAGGAAAATCAAATCGCCGTGGCTCGAGCCAAAAACCTGACAAAGTTCAACTAATTGAACTCAGGCGGGCGTATAACTGTGAGATTATGCTTACAAAAGTTAAAATCCCATTGCCTGATTTAATGGGTCATGTTCTCGCATTGGACGATTCCGTGTTATATGTTGATCAGGTTGAGAACCTCATAAAGTTCTGTCCGACTAAAGAAGAGATGGACCAGCTCAAGGCATATACTGGAGATAAGGAAAATTTGGGGAAGTGTGAACAGTTCTTCTTAGAGTTAATGAAGGTTCCAAGAGTGGAAAGCAAGCTAAGAGTTTTCTGTTTTAAGATGCAATTCTGCTCCCAGGTTTCAGAGCTCAAAAGGGACTTGAATATCGTAAATTCTGCATCTGAAGAGATAAGGAATTCAGTCAAATTGAAAAGAATCATGCAGACCATTCTTTCTCTTGGCAATGCTTTGAATCATGGAACTGCAAGAGGTTCTGCTGTTGGGTTCCGTTTGGATAGTCTTCTTAAACTCACTGATACACGAGCCCGAAACAACAAAATGACCCTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTTCCGGAACTTTTAGATTTCTCCAAAGACCTGGTCAATTTGGAGGGTGCAACCAAGATACAATTGAAATATTTGGCAGAAGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAATTCAAGAATTGTCTGCATCAGAGAATGATGGACCCGTGTCAGAAGTCTTCTGCCAGATTCTGAAAGAATTTCTCAGTGATGCTGAAGCTGAAGTGAGGTCTTTGGCTCAGCTTTATACCAATGTGGGTAGAAATGCAGATGCATTAGCGTCATACTTCGGAGAAGACCCACAACGTTGCCCATTTGAACAAGTTGTAGCTACTCTGATGAACTTTGTGAGGATGTTCATCCGAGCACACGACGAAAATGTCAAGCAGATTGAATATGAAAAAAAGAAAGCAGACAAGGAAGCAGCAGAAAATGAAAAGTCGAAGCTAGCTAGAAATGAATCTGGACATATGATGAGGACCTCCATCAAGAGTGGTAATATTAAATAG 5187 0.4116 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMDEDEYKVYIGGIIRQIREHFPDASFMVFNMREGENQSHISNILCDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGNQNIVLMHCERGGWPVLAFMLAALLIYRKMYTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRQIPNMDGEGGCRPIFRIYGQDPFIPANRSPKVLFSTPKKSKLVRHYKQSDCELVKIDIHCHVQGDVVLECISLDSDVEREQMMFRVMFNTAFIRSNILMLNRDEIDILWNTKDHFPKTFRVEVLFSDMEASSSSVISVDLPRIEEKEGLPVEAFAKVKEIFSNVEWLDSKTDVANVLQQITASNMLLERLDSGASASTCTLLNESLSGRLKFDSKSQSQTNSPKSSVHEERSVSPLQLSEDVPMDKMIKPVKIEELSAEKIKTPASLGPASKPILSFDLSKDSDSTKKETESSEPKKSLENDPEFPASTAQVKQSIPLIEPSIDADSMKMKTGSLESDKKNIESFASKNMESLASKAVLENNTMFPASESNTNAISMKNIGLLRSKVKEIESLFSEALLEKDRIVKFEPKTLLEVDTNSPRSAGQEKLSVSSFESIGDAAMEKKKEALRLTASPENNIKTPAPTDSSPTEMKIESLELKGPVENDTKFPMSPAQTKQSIPLTEPSTKANSLEKMEKLESKEKDIELLESKSLLENDTKKEQSVPLIQTSKDASSLKTVTEKSESTVLSETDIRSPTSKVDNKQISPLIEPSIDAKSIKKKIDPQQLQVSLQLPTQSKIISPRTHQAIRPASTSASYSPTSLLGSPVAISRYQNSPSALGITTVLQDHTPMDIKEEVTHAASVSPRSDSKVPKSVEPCSTSIPTTSSSPELLPSSPLKSSDPKVPKSVELCSTSIPTTSSSLELLPSLPLKSSDSKVSKSVELCSTSIPTTSSSPEFLPSSPLKSSDSKALKSVEPCSTSIPTASSPPEFLPSLPLKSSDSKALKSVELCSTSIPTTSSPPELLPSSPLKTLDSKALKSVEPCSTSIPTTLSPELLSSSPLKSSSVDPLAAMEKTFKPIIPIPPPPPQQSENSMHDTNQISSSIPPPPPPPFLPETSFSTVENSLKHPPPHPPPPPPPPPSSTGQTSSSSIPPPLQSMNNSVAMSGPPPPPPPPRQPGTTPGSTSTPLAPPPPPPPGFAIQNSLSKGPANIPPVPPPPSPSANGLSNSAASPQSRAIPGPPGTAPPIPGPPGNVPPIPGPPSGAFGAKGRGLLRTNAKTQTKRSNLKPYHWLKLTRAMHGSLWAETQKLDEASRAPEFDMSELETLFSANNPSSNHEKGGKSNRRGSSQKPDKVQLIELRRAYNCEIMLTKVKIPLPDLMGHVLALDDSVLYVDQVENLIKFCPTKEEMDQLKAYTGDKENLGKCEQFFLELMKVPRVESKLRVFCFKMQFCSQVSELKRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFSKDLVNLEGATKIQLKYLAEEMQAISKGLEKVIQELSASENDGPVSEVFCQILKEFLSDAEAEVRSLAQLYTNVGRNADALASYFGEDPQRCPFEQVVATLMNFVRMFIRAHDENVKQIEYEKKKADKEAAENEKSKLARNESGHMMRTSIKSGNIK 1728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00536 1728 SMART it6_source 1048 1724 IPR015425 -
Mepo4g00536 1728 SMART PTEN_C2_2 197 337 IPR014020 -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 1193 1228 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 482 522 - -
Mepo4g00536 1728 Gene3D Formin, FH2 domain 1324 1717 IPR042201 -
Mepo4g00536 1728 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 1173 1192 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 1070 1298 - -
Mepo4g00536 1728 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 491 511 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 1155 1172 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 977 1000 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 663 681 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 1696 1728 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 1356 1382 - -
Mepo4g00536 1728 Gene3D - 196 341 - -
Mepo4g00536 1728 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1305 1705 IPR015425 -
Mepo4g00536 1728 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Mepo4g00536 1728 Coils Coil 720 740 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 760 795 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 887 934 - -
Mepo4g00536 1728 Pfam Formin Homology 2 Domain 1307 1679 IPR015425 -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 760 794 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 891 924 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 1267 1291 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 1070 1094 - -
Mepo4g00536 1728 PANTHER FORMIN-J 1 576 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 422 453 - -
Mepo4g00536 1728 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1318 1698 - -
Mepo4g00536 1728 Coils Coil 1680 1712 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 698 718 - -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 422 443 - -
Mepo4g00536 1728 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 660 725 - -
Mepo4g00536 1728 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Mepo4g00536 1728 MobiDBLite consensus disorder prediction 1696 1713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00536 Mepo-Chr4 7625468 7636557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00536 763 877 FH2 protein (formin) Gene Family AT2G25050 39.496 3.59e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00536 - - tpra:123915978 1369.76