Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00535 ATGGCTATTAGAATGGATGAAAAGGTGGAAACTCTTGAACTAGAGTTACAACAAGTGAGAGAGGAGAACAATACTCTAAGATTCATGCTTGAAGTTATGAGTATCAAGTGCACAAAGCTTGAATCCCATCTTCAAGATATCAAAAAGGAAGAATATAGGGGAATCATCATAAGTTCAAATCATCAAATTGGGTCAATACCTAACATTGATTCAAGCAAAAGAGCAAGACTAGAGATTCCCACAGCACAAAAGCCACTACAAGTCTTTGTACGAACTCAACCTAATAATGAAAGTTTGATAATAAAAGATGGCTATCAATGGAGGAAGTATGGTCAAAAGGTTACCAAAGACAATGCTTCTCCTAGAGCTTACTTTAGGTGTTCCATGGCTCCTAGTTGCCCCGCAAAAAAGAAGGTGCAAAAATGCATACATGATAGGTCTATCCTTGTTGCAACATATGATGGAGAGCACAACCATGGTGTCCCTAATGAGTCATTCAAACCATCTTCATCCACACCTAAAGGTTCATCAATCTCTAATAATAAATTACCAACAATGTTGAATGACAAAAAAGCCACAAACACTAGACTTTGTGAGGATGTTATGCAACAGTTTGGCTTTGGAAGGCACATGAAAATTGAAGAATATGCAAGTTCCCTAATCAATGATCCTGATTTCACTGCAGCATTAGCTGAAGCAGTTGCTCAAACAATCACTAATCAAGAACATAAGCGACAAGGTCTAAATCTCGATTTGAATCTTTCAGAAGAGTGA 774 0.3747 MAIRMDEKVETLELELQQVREENNTLRFMLEVMSIKCTKLESHLQDIKKEEYRGIIISSNHQIGSIPNIDSSKRARLEIPTAQKPLQVFVRTQPNNESLIIKDGYQWRKYGQKVTKDNASPRAYFRCSMAPSCPAKKKVQKCIHDRSILVATYDGEHNHGVPNESFKPSSSTPKGSSISNNKLPTMLNDKKATNTRLCEDVMQQFGFGRHMKIEEYASSLINDPDFTAALAEAVAQTITNQEHKRQGLNLDLNLSEE 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00535 257 Coils Coil 2 29 - -
Mepo4g00535 257 SMART WRKY_cls 101 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g00535 257 SUPERFAMILY WRKY DNA-binding domain 97 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g00535 257 MobiDBLite consensus disorder prediction 163 186 - -
Mepo4g00535 257 MobiDBLite consensus disorder prediction 157 186 - -
Mepo4g00535 257 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 8 241 IPR044810 GO:0003700
Mepo4g00535 257 Pfam WRKY DNA -binding domain 102 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g00535 257 Gene3D WRKY domain 87 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g00535 257 ProSiteProfiles WRKY domain profile. 96 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00535 Mepo-Chr4 7623676 7625249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00535 73 243 WRKY Transcription Factor Family AT1G80840 43.386 1.93e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo4g00535 WRKY 2.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00535 - - mtr:11435998 449.899