Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo4g00534 | ATGTTGATTTTAAAAAAAATATTTCCTCTACCTGAATTTAGAGAAAATGGATGTATTGGATTTGGATTTGCGCTTCAACATATCAATATCTTTGTAGACGAAGTTTTGGTTGAAGAGTTACATCGTCTCAGTTGTGAGAACAAGAGGCTTAATGAAACATTGACAAACATGTGTGAAAATTATGAGACTATGCAAAAGCAATTGAATCAATTGATGAATCAAAATTTTGAAAACCAAACACAACAATCAAGGAAGAGAAAAGCTGAGAGTGAAAGTTGCATCAATATGTTTGGTATTATCAATAATAATGATTGCAGTACTGTTTCTGATGAAGAATCAATAATCAAAAGGCCATGTAGGGATATTTCCTCACCTAAGGCTTATAAGGTTCTTGTGAAGACAGAAGCATCTAGTAATAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGCCAGAAGGTTACTAGAGATAACCCCTCTCCTAGAGCTTACTTTAGGTGCTCCTATGCTCCAAGCTGCCCAGTTAAAAAGAAGTTGATTTTTCCTACCAACCACATTTTTTCATATAAAGACTTTAATATGAGACTTCTAAGTTTTAAAATTATCTTATTTTTCACTTTATTTTTTCTTTTCAAAGATTTGTACAAGAAAAATGAAATTTTGCAACCATTTTTTAACTGCAAATTTAAAAATAAAGTTTTGCAACAGTTTTTTAACTGCAAATTTAATATGGATTTGTATATTATTATTATTATTATTATTATTATTATTATTTAG | 783 | 0.2963 | MLILKKIFPLPEFRENGCIGFGFALQHINIFVDEVLVEELHRLSCENKRLNETLTNMCENYETMQKQLNQLMNQNFENQTQQSRKRKAESESCINMFGIINNNDCSTVSDEESIIKRPCRDISSPKAYKVLVKTEASSNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSYAPSCPVKKKLIFPTNHIFSYKDFNMRLLSFKIILFFTLFFLFKDLYKKNEILQPFFNCKFKNKVLQQFFNCKFNMDLYIIIIIIIIIII | 260 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo4g00534 | 260 | Pfam | WRKY DNA -binding domain | 145 | 181 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mepo4g00534 | 260 | ProSiteProfiles | WRKY domain profile. | 138 | 181 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mepo4g00534 | 260 | Coils | Coil | 40 | 74 | - | - | |
Mepo4g00534 | 260 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 35 | 180 | IPR044810 | GO:0003700 | |
Mepo4g00534 | 260 | SUPERFAMILY | WRKY DNA-binding domain | 140 | 182 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mepo4g00534 | 260 | Gene3D | WRKY domain | 128 | 187 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mepo4g00534 | 260 | SMART | WRKY_cls | 143 | 196 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo4g00534 | Mepo-Chr4 | 7610089 | 7619674 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo4g00534 | 35 | 181 | WRKY Transcription Factor Family | AT1G80840 | 48.701 | 3.76e-38 | 134 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Mepo4g00534 | WRKY | 6.9e-15 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo4g00534 | - | - | gmx:100810978 | 194.897 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo4g00534 | 4 | 7610089 | 7619674 | Mepo3g07381 | 3 | 87178839 | 87182040 | PCT |