Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00534 ATGTTGATTTTAAAAAAAATATTTCCTCTACCTGAATTTAGAGAAAATGGATGTATTGGATTTGGATTTGCGCTTCAACATATCAATATCTTTGTAGACGAAGTTTTGGTTGAAGAGTTACATCGTCTCAGTTGTGAGAACAAGAGGCTTAATGAAACATTGACAAACATGTGTGAAAATTATGAGACTATGCAAAAGCAATTGAATCAATTGATGAATCAAAATTTTGAAAACCAAACACAACAATCAAGGAAGAGAAAAGCTGAGAGTGAAAGTTGCATCAATATGTTTGGTATTATCAATAATAATGATTGCAGTACTGTTTCTGATGAAGAATCAATAATCAAAAGGCCATGTAGGGATATTTCCTCACCTAAGGCTTATAAGGTTCTTGTGAAGACAGAAGCATCTAGTAATAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGCCAGAAGGTTACTAGAGATAACCCCTCTCCTAGAGCTTACTTTAGGTGCTCCTATGCTCCAAGCTGCCCAGTTAAAAAGAAGTTGATTTTTCCTACCAACCACATTTTTTCATATAAAGACTTTAATATGAGACTTCTAAGTTTTAAAATTATCTTATTTTTCACTTTATTTTTTCTTTTCAAAGATTTGTACAAGAAAAATGAAATTTTGCAACCATTTTTTAACTGCAAATTTAAAAATAAAGTTTTGCAACAGTTTTTTAACTGCAAATTTAATATGGATTTGTATATTATTATTATTATTATTATTATTATTATTATTTAG 783 0.2963 MLILKKIFPLPEFRENGCIGFGFALQHINIFVDEVLVEELHRLSCENKRLNETLTNMCENYETMQKQLNQLMNQNFENQTQQSRKRKAESESCINMFGIINNNDCSTVSDEESIIKRPCRDISSPKAYKVLVKTEASSNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSYAPSCPVKKKLIFPTNHIFSYKDFNMRLLSFKIILFFTLFFLFKDLYKKNEILQPFFNCKFKNKVLQQFFNCKFNMDLYIIIIIIIIIII 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00534 260 Pfam WRKY DNA -binding domain 145 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g00534 260 ProSiteProfiles WRKY domain profile. 138 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g00534 260 Coils Coil 40 74 - -
Mepo4g00534 260 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 35 180 IPR044810 GO:0003700
Mepo4g00534 260 SUPERFAMILY WRKY DNA-binding domain 140 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g00534 260 Gene3D WRKY domain 128 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g00534 260 SMART WRKY_cls 143 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00534 Mepo-Chr4 7610089 7619674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00534 35 181 WRKY Transcription Factor Family AT1G80840 48.701 3.76e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo4g00534 WRKY 6.9e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00534 - - gmx:100810978 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00534 4 7610089 7619674 Mepo3g07381 3 87178839 87182040 PCT