Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00530 ATGGAAGAAGTGAAAGCACACATGCTATTTGGCAAGTACGAGATGGGAAGAGTACTAGGTAAAGGAACATTTGCAAAAGTGTACTATGCCAAAGAAATTTCAACAGGAGAAGGTGTAGCAATTAAGGTTGTAGACAAAGACAAAGTGAAAAAAGAAGGCATGATGGAACAAATCAAACGTGAAATTTCCGTCATGAGGTTAGTAAAACATCCAAACATCGTCAACCTTAAAGAAGTCATGGCAACAAAAACCAAAATCTTGTTTGTCATGGAATATGCACGTGGCGGCGAATTATTCGAGAAGGTAGCAAAAGGTAAATTTAAAGAAGAACTTGCAAGAAAGTACTTCCAACAGCTTATAAGCGCTGTAGATTATTGCCATAGTAGAGGTGTTTCTCATCGTGATTTAAAACCGGAGAATTTATTACTCGATGAAAACGAGAATCTTAAAGTCTCCGATTTTGGTCTCTCCGCTTTGCCTGAACACCTTCGTCAGGACGGACTTTTACATACTCAATGTGGAACTCCAGCTTATGTGGCACCCGAGGTAGTTAGAAAAAGAGGTTATAACGGTTTTAAAGCTGATACTTGGTCTTGTGGTGTTATTCTTTATGCTTTACTTGCTGGATTTTTACCTTTTCAACATGAAAATTTAATTTCCATGTATAATAAAGTTTTCAAAGAAGAATACCAATTTCCACCTTGGTTTTCACCCGAATCAAAGAGATTAATCTCAAAGATTCTTGTGGCGGATCCTGATAGAAGAATCACTATTTCTTCAATCATGAATGTTCCATGGTTTCAAAAAGGTTTATCGTCACTATCAACAAGTACTATTGCAAATGATGATTTGGAGTTGGAATCAAAAATGAATTTGATAAACTCAACGCCGCAATTTTTCAATGCGTTCGAGTTCATTTCTTCAATGTCTTCGGGATTTGATCTTTCGGGTTTGTTTGAAGAAAAGAAAAAAAGAGGTTCGGTTTTCACTTCAAAGTGTTCTGTCTCAGAAATTGTGACAAAAATTGAAAGTGCTGCGGAAAGTTTAAGGTTTAAGGTTAAGAAGGTGAAGGATTTCAAATTAAGGTTACAAGGGTTGATTGAAGGGAGAAAAGGAAAATTGGCGGTGACGGCCGAGATATACGAGGTGGCACCGGAGCTTGCAGTGGTTGAATTTTCTAAATGTTCCGGTGATACTTTTGAATATGTCAAGTTGTTTGAAGAAGATGTTAGGCCTGCTCTCAAAGACATTGTTTGGTCATGGCAAGGGGAGTGA 1275 0.3757 MEEVKAHMLFGKYEMGRVLGKGTFAKVYYAKEISTGEGVAIKVVDKDKVKKEGMMEQIKREISVMRLVKHPNIVNLKEVMATKTKILFVMEYARGGELFEKVAKGKFKEELARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDENENLKVSDFGLSALPEHLRQDGLLHTQCGTPAYVAPEVVRKRGYNGFKADTWSCGVILYALLAGFLPFQHENLISMYNKVFKEEYQFPPWFSPESKRLISKILVADPDRRITISSIMNVPWFQKGLSSLSTSTIANDDLELESKMNLINSTPQFFNAFEFISSMSSGFDLSGLFEEKKKRGSVFTSKCSVSEIVTKIESAAESLRFKVKKVKDFKLRLQGLIEGRKGKLAVTAEIYEVAPELAVVEFSKCSGDTFEYVKLFEEDVRPALKDIVWSWQGE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00530 424 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Mepo4g00530 424 FunFam Non-specific serine/threonine protein kinase 6 301 - -
Mepo4g00530 424 Gene3D Kinase associated domain 1, KA1 294 420 - -
Mepo4g00530 424 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
Mepo4g00530 424 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Mepo4g00530 424 SUPERFAMILY Protein kinase-like (PK-like) 9 279 IPR011009 -
Mepo4g00530 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Mepo4g00530 424 ProSiteProfiles NAF domain profile. 295 320 IPR018451 GO:0007165
Mepo4g00530 424 Gene3D Transferase(Phosphotransferase) domain 1 93 273 - -
Mepo4g00530 424 ProSiteProfiles Protein kinase domain profile. 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00530 424 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 415 - -
Mepo4g00530 424 Pfam Protein kinase domain 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00530 424 SMART serkin_6 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00530 424 FunFam Non-specific serine/threonine protein kinase 295 419 - -
Mepo4g00530 424 CDD CIPK_C 301 415 - -
Mepo4g00530 424 Pfam NAF domain 297 355 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00530 Mepo-Chr4 7537217 7539130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00530 2 424 CBL-interacting serine-threonine protein kinases AT5G25110 66.743 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mepo4g00530 Pkinase 3.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00530 - - gmx:100817520 622.468