Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00528 ATGATGAACATGGAAAATGCGAGGGCAACAATCAAAGTTTGGTGGGATGTTGAAAGTTGTCCGGTTCCAGCAAACTTTGACGGCCTTTACTACATTGCTAAGAATATTCGCCTGGCTCTTTCAAACGAAAACTTTCATGGAACACCATCAATTTATGCTTATGGAGACAGAGATGGCATCCCTAGTGAGGTTTGTACTGCCCTCTACCGCACGGGCATCTCCCTTTATCACGTCCCCACCGGAGGTGCGTACAAACAGATTGCAATGGAAATGATAGTTTGGATGTCAGACAATCCTGCACCTGCAACTTTTCTTTTGATTTCTGGCAATGATAGTTTCTCACGTCTTCTTCATGACCTTTCTGTGAGAAGTCACAACATTCTTCTTTCTGGACCTTCACAACTTGATGAATCACTCACCGCAAACGCCAATTTCATTTGGCATTGGCCTACACTCATTTCTCAGGGCAGGCCCCTTAACACTGCTGAACAGATGACGAATATGGAAAATGCATATACAAATATCTCCGTTTGGTGGGACATTGAAAGCTGCCCTATTCCAACAAACTTTGACGGCATTGACTACATTGCTAAGAATATTTGCATAGCTCTTTCAAATGCCAACTTTCATGGCAAACTATCCATTTCTGCTTATGGAAACACCGACCTCATCCCTGGTGAGGTTCAAAATGCACTTCAGCGCACAGGCATCTCCTTTCATCACGTCCCCACCGGAGGTATGTACAAAGAGGCCATATGGGATATGTCAAAGTGGATGTCAGTCAATCCTGTCCCTGCAAATATTCTGTTGATTTCTGACGATGATAGTTTCTCAGTTTCCATCATAATCGCGAGAGGAACAGGGTGGGGAAAGCGGCATCTAGTGATGTGTGGTCATAGGCTCATAGCAAACATTGGAGATGGAGTACTCAAATGGGGGTCTAGTTCTTTATTTTATGGTAGCTTGTCTTGGAAGAAATTAAGGATTTGGTATTCTAATGGTCATAAAGGACCTCATTAG 1020 0.4343 MMNMENARATIKVWWDVESCPVPANFDGLYYIAKNIRLALSNENFHGTPSIYAYGDRDGIPSEVCTALYRTGISLYHVPTGGAYKQIAMEMIVWMSDNPAPATFLLISGNDSFSRLLHDLSVRSHNILLSGPSQLDESLTANANFIWHWPTLISQGRPLNTAEQMTNMENAYTNISVWWDIESCPIPTNFDGIDYIAKNICIALSNANFHGKLSISAYGNTDLIPGEVQNALQRTGISFHHVPTGGMYKEAIWDMSKWMSVNPVPANILLISDDDSFSVSIIIARGTGWGKRHLVMCGHRLIANIGDGVLKWGSSSLFYGSLSWKKLRIWYSNGHKGPH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00528 339 CDD PIN_limkain_b1_N_like 174 276 - -
Mepo4g00528 339 CDD PIN_limkain_b1_N_like 11 132 - -
Mepo4g00528 339 Pfam NYN domain 11 147 IPR021139 GO:0004540
Mepo4g00528 339 Pfam NYN domain 175 285 IPR021139 GO:0004540
Mepo4g00528 339 PANTHER LIMKAIN B LKAP 8 153 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00528 Mepo-Chr4 7513455 7516317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00528 165 278 C2H2 Transcription Factor Family AT5G61190 44.538 2.46e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00528 - - mtr:120579562 291.197