Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00518 ATGTTTCGCCTTTTTCGAACCAGACTTCTCCTTGAGACGACTATGGAATATGCCAAGAAAAAGATATCAGTGTGGTGGGACCTTAACAGCTGCCAGGTTCCAACTGACTTTAAGAAAGTTAGCTCCATAGCGAAAAACATTCGTCTAGCTTTGAGGAACGCCAACTTTCATGGAGAAATTACTGTTAAGGCCTATGGAGACGAGGATATAATCCCCTCTGAAGTTCGACACGCACTTTATTTCACTGGCATTTCTCTCTATAAATCCGGTGTAAATGATAGTTACAAAAGTATTTGGATGAATATGCTTATGTTCCCTTTGGATAATCCCACCCCTGCCAATATTTTGTATATTGGTCGTGGTGGTTATGCTATCACTACGGCTCTTAATTCTCTTGCTGACCAAAACTTTAACATTCTACTTGCGGTACCATCAGTAGCTGATGCTGATGCTGGTGCGTCGTTCACTGCCGCTGCCTCCGCGATTTGGCTCTTGCCCACACTCCTCTCGGGTGGGAGCCCTATGGGACAGGAGCATGTGCAAGAGCAGACCATGGAATATGCAAAGAAGAGCATTTCAGTTTTCTGGAACGTTGGCATTTGTAAAGTTCCAACAACAGATCGCTCTTTCAAATGCCCGTACAAGGATATAATCTCCGCTGAAGTTGTAAATGAACTTTACTCCTCTGGCATCTCCATCCATCACAAACCTGGTGTGGATGCAAGTTACAGTACGATTATGTTTGATATGCTGTCATGGTTTGGGAAAAATCGAGATAACCCTTCAAATATTTTGTATATTGGTGATGATGGTGGTTGTATCTCTGAGACTCTTAACACTCTTGCCATGAAACAACACAACATTCTCCTGGCAGTACCATCACAATCTCATGCTGATGCTGATGAGTCTCTCACTGCCGCTGCATCCACCATTTGGCTCTGGCCCACACTCGTTTCGGGTGGAAGCCCTATGTACACTGAACAGCAAGCACATGAGCAAGTGCAGGAGCTAATGCAGGGCGGAGAAAGTGGCATCTAG 1038 0.447 MFRLFRTRLLLETTMEYAKKKISVWWDLNSCQVPTDFKKVSSIAKNIRLALRNANFHGEITVKAYGDEDIIPSEVRHALYFTGISLYKSGVNDSYKSIWMNMLMFPLDNPTPANILYIGRGGYAITTALNSLADQNFNILLAVPSVADADAGASFTAAASAIWLLPTLLSGGSPMGQEHVQEQTMEYAKKSISVFWNVGICKVPTTDRSFKCPYKDIISAEVVNELYSSGISIHHKPGVDASYSTIMFDMLSWFGKNRDNPSNILYIGDDGGCISETLNTLAMKQHNILLAVPSQSHADADESLTAAASTIWLWPTLVSGGSPMYTEQQAHEQVQELMQGGESGI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00518 345 CDD PIN_limkain_b1_N_like 21 144 - -
Mepo4g00518 345 Pfam NYN domain 21 147 IPR021139 GO:0004540
Mepo4g00518 345 PANTHER LIMKAIN B LKAP 186 318 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00518 Mepo-Chr4 7394888 7396597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00518 186 326 C2H2 Transcription Factor Family AT5G61190 33.333 1.68e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00518 - - mtr:120579562 214.542