Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00516 ATGGTTTGTGAGATGGAGAGTGATTGTATTGAAGACATCATGGACATTGAAGTTTTATCTTCAATGTGGCCAGAAGATGTTGGAACTGATGTTGGAAAACAATTCAACATAGAAAAACCAGGAAGAGATCAAGATATGTTGGAAGAAGTAACAATCTTAGAAGAACCAGCTATAGCTGATTTTCAAAGACTAATGGAGCTTACAAATTATACAGATAAAGGGTCATCTCAATTGGCTTATTTAATGCAACATTGGGAGTATAAGCAGGCGAACGCGGTTCGGCTTCTCCGGGAAGAGCTTGACAATCTTAGCAAACAAAGGAAGGAAGTTGAGCTAAGAAAATTGGAGATACTTAAAGAGAATAATCGATTCGAGGAAGAGATTAGTTATGGAGGAGACAAACGTCCGGTTTCAATATTGGACGATGCTTACTATACATGGCAAGATCTACCGGCCGCGATAAGGAAAAGTGATGTTGTTGTTCAAAACAAGAGAATTGAAATTGAGGCTGAGTATGATACTGTTGTTTACTGGAAACAACGGTCGCAAGATTTTGAAAAACAGTTGGAAGCGAGTATTCGGAGAGAGGATATATTAAAGGAGAAATTGCAAGAAAGTATAGAGACTATTGAAAGACAATCATCACCTGTGGAGGAACTGTCACAGATTCTTAAGAGAGCAGATAATTTCTTACATTTTATACTTCAAAATGCACCTGTTGTTATTGGCCATCAGGACAAAGAGTTGCGCTATCGTTTTATCTATAATCATTTTCCAAGTTTACAAGAAGAGGACATTATAGGAAAAACAGATGTCGAAATTTTCACCGGAGCAGGTGTGAAGGAATCTCAAGATTTTAAGAGAGAAGTAATGGAGAAAGGAGTGCCTGCAAAAAAGGAAATAACTTTTGAGACAGAACTATTTGGATTTAAGACATTTTTGATATATGTAGAACCTGTGTTTAGCAAAGCAGGTGAAACAATTGGAGTAAACTATATGGGAATGGAAATAACAGATCAGGTGAGAAAGAGAGAAAGAATGGCAAAGCTAAGGGAAGAAATTGCAGTTCAGAAAGCAAAGGAAACAGAACTTAATAAAACCATTCACATTACAGAGGAGACAATGAGAGCAAAACAAATGCTGGCAACAATGTCTCATGAGATAAGATCACCGCTTTCTGGTGTTGTTAGCATGGCTGAAATTCTTACAACAACAAAACTTGATAAAGAGCAAAGACAGCTATTGGATGTCATGTTATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGATATACTCGATCTTTCCAAGGTTGAGTCAGGAGCTATGAAATTGGAAGCTACAAAATTCAGGCCAAGAGAGGTAGTAAGGCATGTACTCCAGACAGCTGCAGCACCATTGCAGAAAATGTTAACATTGGAAGGAAATGTAGCCGATGATATACCTATTGAGGTCACCGGAGATGTTTTAAGGATTCGGCAGATTCTCACAAATTTAGTCAGCAATGCTGTCAAGTTTACACATCAAGGCAAAGTTGGTATAAACCTTTATGTTGTTCCAGAGCCAGCATTTGCCAAAGAAGAAGAATCTCACCAAAAGGTGACAGAAGACCAGTCAACTATTTTAGCAAATGGATTGAAGGAAGAGAAACATACAGCATCGCCAAGAAGTACTAGATGTGATCAAAATCATATCGATGATAGAAAACACGCTGACCATCCTATCCAGAATCATGCGTTTAGCAATGAATGTAGATCTTCAGTTAACAGTGAATGCTCAATGAATGATGATACTGAAGAACAAACTCATTCAACTGAAACAACAGTGTGGATACGTTGTGATGTGTATGACACAGGAATTGGCATACCAGAAAAGGCTATACCTACTTTATTTAGAAGGTACATGCAAGTTAGTGCAGACCATGCTCGAAAATATGGAGGCACAGGTCTAGGATTAGCAATATGCAAACAACTGGTTGAATTAATGGGGGGTCGTCTAACGGTGACTAGCAAAGAACATTGTGGTTCTACCTTCACATTCATACTACCATACAAGGTTTCAACAGCTTGTGAAAATTCTGATGATCCAGATGATCTTTCGGATGTCGATAATAACGAAGATGACACCACTGAGGGATTCTTCCAATTCCAACCACGAACTTTGGGCTCGCTTTTCACTTCGAATGGATCCACCAGGCCACACAGAATCTCACACAAGTTCAATGGTTTTCCGGACAACGATTCTTACTCAAACCATTCTAGTAACATCATTTCAAATGGAACAAATTCAATTGAGGATGCATCTTCTGTTATTGTTGATGCTTCAGATATGTCAGAATCAACAAATTCGTTTAGTCACAGCCTAGAAACTAAGCATGAAAGTTTATGTAATGGAAACAAACAAAACCATGATAATAATAAGGCACATGATAGGTTACAAAATGGTAGTGCAAACTCTATTCAGTGGAAGGAAGCAAGTAGAGAAATGAATTTAGAAACAAAGTCAAGTGAATCACAACAAACATGTCAGGGTCAAGGGAAGGAAGATAGTACTACTAGCACTAGCACATCATCAGAAGTAACCAAATCGACGTTAAAGCCGAATATTCTTCTTGTTGAAGATAACAAGATTAATATCATGGTGACAAAGTCAATGATGAAGCAGCTAGGATATAGCATGGATGTCGTGAATAATGGAGTGGAAGCCATACGCGCAGTTCAGAGCCATTCTTACGACATTATTTTGATGGATGTTTACATGCCCGTTATGAATGGTCTTCAAACAACAAAACTGATTAGGTCTTATGAGGAAACAGGCAATTGGGATGCTGCAAGAGAAGCTGGAGTTGAACAAAGTTTATCAGCTTCAGATGAATGTTCTATGCCACCTGAAAAGCGCATCCACATTGTCGCGATGACAGCAAACACAATGTCAGAGAGTGCTGAAGAATGTTTCGCCAACGGTATGGACGCATTTGTGTCAAAACCAGTGACATTCCTAAAATTGAAAGAGTGTCTTGAAAAGTATCTAAGGTGA 3036 0.3837 MVCEMESDCIEDIMDIEVLSSMWPEDVGTDVGKQFNIEKPGRDQDMLEEVTILEEPAIADFQRLMELTNYTDKGSSQLAYLMQHWEYKQANAVRLLREELDNLSKQRKEVELRKLEILKENNRFEEEISYGGDKRPVSILDDAYYTWQDLPAAIRKSDVVVQNKRIEIEAEYDTVVYWKQRSQDFEKQLEASIRREDILKEKLQESIETIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGAGVKESQDFKREVMEKGVPAKKEITFETELFGFKTFLIYVEPVFSKAGETIGVNYMGMEITDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILTTTKLDKEQRQLLDVMLSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVRHVLQTAAAPLQKMLTLEGNVADDIPIEVTGDVLRIRQILTNLVSNAVKFTHQGKVGINLYVVPEPAFAKEEESHQKVTEDQSTILANGLKEEKHTASPRSTRCDQNHIDDRKHADHPIQNHAFSNECRSSVNSECSMNDDTEEQTHSTETTVWIRCDVYDTGIGIPEKAIPTLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKEHCGSTFTFILPYKVSTACENSDDPDDLSDVDNNEDDTTEGFFQFQPRTLGSLFTSNGSTRPHRISHKFNGFPDNDSYSNHSSNIISNGTNSIEDASSVIVDASDMSESTNSFSHSLETKHESLCNGNKQNHDNNKAHDRLQNGSANSIQWKEASREMNLETKSSESQQTCQGQGKEDSTTSTSTSSEVTKSTLKPNILLVEDNKINIMVTKSMMKQLGYSMDVVNNGVEAIRAVQSHSYDIILMDVYMPVMNGLQTTKLIRSYEETGNWDAAREAGVEQSLSASDECSMPPEKRIHIVAMTANTMSESAEECFANGMDAFVSKPVTFLKLKECLEKYLR 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00516 1011 SMART HKATPase_4 487 686 IPR003594 -
Mepo4g00516 1011 MobiDBLite consensus disorder prediction 778 802 - -
Mepo4g00516 1011 SMART REC_2 867 1006 IPR001789 GO:0000160
Mepo4g00516 1011 CDD HATPase_EvgS-ArcB-TorS-like 492 683 - -
Mepo4g00516 1011 MobiDBLite consensus disorder prediction 811 863 - -
Mepo4g00516 1011 SUPERFAMILY CheY-like 867 1011 IPR011006 -
Mepo4g00516 1011 ProSiteProfiles Response regulatory domain profile. 868 1010 IPR001789 GO:0000160
Mepo4g00516 1011 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 375 441 IPR036097 GO:0000155|GO:0007165
Mepo4g00516 1011 FunFam Histidine kinase 5 218 353 - -
Mepo4g00516 1011 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 459 683 IPR036890 -
Mepo4g00516 1011 ProSiteProfiles Histidine kinase domain profile. 383 686 IPR005467 -
Mepo4g00516 1011 Gene3D - 860 1011 - -
Mepo4g00516 1011 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 487 684 IPR003594 -
Mepo4g00516 1011 Coils Coil 93 127 - -
Mepo4g00516 1011 CDD HisKA 378 437 IPR003661 GO:0000155|GO:0007165
Mepo4g00516 1011 Gene3D PAS domain 217 353 - -
Mepo4g00516 1011 FunFam Histidine kinase 5 861 1011 - -
Mepo4g00516 1011 SMART HisKA_10 376 441 IPR003661 GO:0000155|GO:0007165
Mepo4g00516 1011 FunFam Putative histidine kinase 5 364 441 - -
Mepo4g00516 1011 Coils Coil 347 367 - -
Mepo4g00516 1011 FunFam Probable histidine kinase 1 575 689 - -
Mepo4g00516 1011 Gene3D - 364 441 - -
Mepo4g00516 1011 Pfam His Kinase A (phospho-acceptor) domain 378 441 IPR003661 GO:0000155|GO:0007165
Mepo4g00516 1011 Gene3D - 442 690 IPR036890 -
Mepo4g00516 1011 MobiDBLite consensus disorder prediction 778 863 - -
Mepo4g00516 1011 CDD REC_hyHK_CKI1_RcsC-like 869 1006 - -
Mepo4g00516 1011 PRINTS Bacterial sensor protein C-terminal signature 670 683 IPR004358 GO:0016310|GO:0016772
Mepo4g00516 1011 PRINTS Bacterial sensor protein C-terminal signature 611 625 IPR004358 GO:0016310|GO:0016772
Mepo4g00516 1011 PRINTS Bacterial sensor protein C-terminal signature 646 664 IPR004358 GO:0016310|GO:0016772
Mepo4g00516 1011 Pfam Response regulator receiver domain 869 937 IPR001789 GO:0000160
Mepo4g00516 1011 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 8 1010 - -
Mepo4g00516 1011 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00516 Mepo-Chr4 7362013 7367146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00516 1 1010 Histidine Kinase Gene Family AT5G10720 56.683 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo4g00516 HATPase_c 3.6e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00516 - - cam:101512841 1733.77