Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00515 ATGGATCAAGATATATTAGAAGAAGTAAAAGTCATAAAGGAACCAATTATAGCTGATTTTCAAAGAATTGTGGAGCTTACAGATTATACAGATATAGGGTCTTCTCAGTTAGCTACTCTCACGAAACATTGGGAGTATAAGCAGGCGAATGCAGTTCGCCTTCTTCGAGAAGAGCTCGACAACCTTGGCAAACAAAGGGAGGAAGTTGAGCTTAAAAAGTGTAAGATACTTAAAGACAATAATCAATCCGAGCAAGAAAGTTTCGGTGGAGACAAACATCCGGATTCGATATTGGATGATGTTGGAATAAGGAAAAACGATGCTGTCTTTCAAAACGAGGGAGTTAAAACTGAGGCTGAGTATGATGTTGTTGTTTACTGGAAACAAAGGTCGCAAGATTTGGAAAAACAGTTGGAGGCAAGTATTCGGAGAGAGGAGATATTACAGGAAAAGTTGCAAGAAAGTATAGAGACTATTGAAAGACAATCATCACCTGTGGAAGAACTGTCACAGATTCTTAAGAGAGCAGATAATTTCTTACATTTTATACTTCAAAATGCACCATTTGTTATTGGCCATCAGGACAAAGAGTTGCGCTATCGGTTTATCTATAACCATTTTCCAAGTTTACAAGAGGAGGACCTCATAGGAAAAACAGATGTTGAAATTTTCTCGGGATCAGGTGTGAAGGAGTCTCAAGATTTTAAGAGAGAAGTAATGGAGAAAGGAGTACCTGCAAAAAGAGAAATAACTTTTGAGACAGAACTGTTTAGATCAAAAACATTTTTGTTGTATGCAGAACCTGTGTTTAGCAAGGCAGGAGAAACAATTGGAGTAAACCATATGGGAATGGAAATAACCGATCAGGTGAGAAAGAGACAAAAAATGGCAAAGCTAAGGGAAGAAATTGCAGTTCAGAAATCCATGGAAACAGAACTTAATAAAACCATTCGCATTACAGAGGAGACAATGAGAGCAAAACAAGTGCTAGCAACAATGTCTCATGAGATAAGATCTCCACTTTCCGATGTTGTTAGTATGGCTAAAATTCTAACTACAACAAAACTTGACAGAGAGCAAAAACTGCTCTTAAATGTCATGATATCGTCCGGAGATTTGGTTCTTCAACATATTACCGATATACTTGATCCTTCCAAGGCTGAGTCGGGTTAG 1173 0.3785 MDQDILEEVKVIKEPIIADFQRIVELTDYTDIGSSQLATLTKHWEYKQANAVRLLREELDNLGKQREEVELKKCKILKDNNQSEQESFGGDKHPDSILDDVGIRKNDAVFQNEGVKTEAEYDVVVYWKQRSQDLEKQLEASIRREEILQEKLQESIETIERQSSPVEELSQILKRADNFLHFILQNAPFVIGHQDKELRYRFIYNHFPSLQEEDLIGKTDVEIFSGSGVKESQDFKREVMEKGVPAKREITFETELFRSKTFLLYAEPVFSKAGETIGVNHMGMEITDQVRKRQKMAKLREEIAVQKSMETELNKTIRITEETMRAKQVLATMSHEIRSPLSDVVSMAKILTTTKLDREQKLLLNVMISSGDLVLQHITDILDPSKAESG 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00515 390 CDD HisKA 327 386 IPR003661 GO:0000155|GO:0007165
Mepo4g00515 390 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 316 390 IPR036097 GO:0000155|GO:0007165
Mepo4g00515 390 Coils Coil 131 162 - -
Mepo4g00515 390 Pfam His Kinase A (phospho-acceptor) domain 328 390 IPR003661 GO:0000155|GO:0007165
Mepo4g00515 390 FunFam Histidine kinase 5 167 302 - -
Mepo4g00515 390 FunFam Putative histidine kinase 5 313 390 - -
Mepo4g00515 390 Gene3D - 291 388 - -
Mepo4g00515 390 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 24 390 - -
Mepo4g00515 390 Gene3D PAS domain 157 290 - -
Mepo4g00515 390 SMART HisKA_10 325 390 IPR003661 GO:0000155|GO:0007165
Mepo4g00515 390 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00515 Mepo-Chr4 7346345 7348556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00515 2 390 Histidine Kinase Gene Family AT5G10720 62.916 6.83e-161 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00515 - - mtr:25481969 657.136