Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00505 ATGTCTTGTTCCAATCCTACTAGCAGTATCAATGTCACCACAACTGATAGCAACCCTAATATCAATGTCACCACAACTGATCAAAACCCTAATAGTAGTAATGATAAGATGTATAGAGGGGTGAGGAAGAGAAAATGGGGCAAATGGGTGTCTGAAATTAGGCTTCCAAATAGTAGGGAGAGAATATGGTTAGGATCATTTGACACACAAGAGAAAGCTGCTAGAGCATTTGATGCAGCCCTTTATTGTCTACGTGGTCCTCATGCAAGTTTCAATTTCCCTAATACACCTCTTACCATCAATGTAGCTGTGAATCATGGTGTTGGTCACCAATCTCTTTCACCAGAAGAAATCCAAGAGATTGCTGCGAAATTTGCCAATGAGTCACCAATTGAGGGGACTCAAGAAGATCAACAAGTTCCTTCAGATCCTCTACAATCACAAAATGAAGCCAATTCCAATTCTCATTCATATCCTCTAGATAATGATATTGGTGATTTGAGGAGGATGGATTGGACATTTGAGGATATGTTTGAGGACATGAATGGGGTTGCTAATTGCTCTGATTTTTATGGACTGCAAAATATGCAATACTCAACTCCACCTTTTGAAGAGGATAATGTGGACCAAATTGAATGTGAAGATACTTTTACTAATCATTCAACCCTTTGGAATTGGAACTTTTGA 687 0.3886 MSCSNPTSSINVTTTDSNPNINVTTTDQNPNSSNDKMYRGVRKRKWGKWVSEIRLPNSRERIWLGSFDTQEKAARAFDAALYCLRGPHASFNFPNTPLTINVAVNHGVGHQSLSPEEIQEIAAKFANESPIEGTQEDQQVPSDPLQSQNEANSNSHSYPLDNDIGDLRRMDWTFEDMFEDMNGVANCSDFYGLQNMQYSTPPFEEDNVDQIECEDTFTNHSTLWNWNF 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00505 228 CDD AP2 38 96 IPR001471 GO:0003700|GO:0006355
Mepo4g00505 228 MobiDBLite consensus disorder prediction 1 37 - -
Mepo4g00505 228 MobiDBLite consensus disorder prediction 131 160 - -
Mepo4g00505 228 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Mepo4g00505 228 SUPERFAMILY DNA-binding domain 37 94 IPR016177 GO:0003677
Mepo4g00505 228 FunFam Ethylene-responsive transcription factor 2 36 95 - -
Mepo4g00505 228 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Mepo4g00505 228 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Mepo4g00505 228 MobiDBLite consensus disorder prediction 1 36 - -
Mepo4g00505 228 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Mepo4g00505 228 Gene3D AP2/ERF domain 36 95 IPR036955 GO:0003700|GO:0006355
Mepo4g00505 228 MobiDBLite consensus disorder prediction 131 162 - -
Mepo4g00505 228 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 174 - -
Mepo4g00505 228 Pfam AP2 domain 38 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00505 Mepo-Chr4 7243438 7244124 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00505 27 190 AP2-EREBP Transcription Factor Family AT1G74930 46.746 1.23e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g00505 AP2 2.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00505 - - mtr:25481977 442.58