Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00504 ATGTACAAAGGGGTGAGAAAGAGAAAATGGGGAAAATGGGTATCTGAAATTAGGCTTCCAAATAGTAGGGAGAGAATATGGTTAGGATCATATGACACACAAGAGAAAGCAGCTAGAGCATTTGATGCAGCTCTTTATTGTCTACGTGGTCCTCATGCAAGTTTCAATTTCCCTAACACACCTCTTAGCATCAATTTATATTTTCATCGTAGTGTTTGTCATAACTCCCTTTCCCCTCAAGAGATTCAAGAGATTGCTGCAAAATTTGCCAATGTATTACCAATTGAGCTTACTCAAGAAGAAGATCAACAAGTGCCTTCAGAATCACAAAATGATGTCAATTCCAATTCTTATTCATATCCTCTAGATAATGATATTGGTGATTTGAGGAGGATGGATTGGAGATTTGAGGATATGTTTGATGACTTGAATGGGGTTGCTAATTGCTCCAATTTTTATGGGCTACAAAATATGCAATATTCAACTCCACTTTTTGAAGAGGATAATGTGGACCAAATTGAATGTGAAGATACCTTTTCTAATCATTCAATCCTTTGGAATTGGAACTTTTGA 573 0.363 MYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQEKAARAFDAALYCLRGPHASFNFPNTPLSINLYFHRSVCHNSLSPQEIQEIAAKFANVLPIELTQEEDQQVPSESQNDVNSNSYSYPLDNDIGDLRRMDWRFEDMFDDLNGVANCSNFYGLQNMQYSTPLFEEDNVDQIECEDTFSNHSILWNWNF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00504 190 CDD AP2 2 60 IPR001471 GO:0003700|GO:0006355
Mepo4g00504 190 PRINTS Ethylene responsive element binding protein signature 24 40 IPR001471 GO:0003700|GO:0006355
Mepo4g00504 190 PRINTS Ethylene responsive element binding protein signature 2 13 IPR001471 GO:0003700|GO:0006355
Mepo4g00504 190 SUPERFAMILY DNA-binding domain 2 58 IPR016177 GO:0003677
Mepo4g00504 190 ProSiteProfiles AP2/ERF domain profile. 1 58 IPR001471 GO:0003700|GO:0006355
Mepo4g00504 190 SMART rav1_2 1 64 IPR001471 GO:0003700|GO:0006355
Mepo4g00504 190 Pfam AP2 domain 2 50 IPR001471 GO:0003700|GO:0006355
Mepo4g00504 190 Gene3D AP2/ERF domain 1 59 IPR036955 GO:0003700|GO:0006355
Mepo4g00504 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 136 - -
Mepo4g00504 190 FunFam Ethylene-responsive transcription factor 2 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00504 Mepo-Chr4 7208271 7208843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00504 2 152 AP2-EREBP Transcription Factor Family AT1G74930 54.430 9.24e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo4g00504 AP2 1.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00504 - - mtr:25481977 339.732