Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00501 ATGACTTGTTCCAATCCTACTAGTGGTATCAATGTCACCACAAATGATCACAACCCTAATAGTAGTAATAAGAAAATATATAGAGGGGTGAGGAAGAGAAAATGGGGAAAATGGGTATCTGAAATTAGGCTTCCAAATAGTAGGGAGAGAATATGGTTAGGATCATATGACACACAAGAGAAAGCTGCTAGGGCATTTGATGCAGCCCTATATTGTCTACGTGGTCCTCATGCAAGTTTCAATTTCCCTAATACACCTCTTACCATCAATGTAGCTTTTCATGGTTACCAATCTCTTTCACCACAAGAGATTCAAGAAGTTGCTGCTAGATTTGCAAATGAGTCACCACCAAAAAAGCTCACTCAAGAAGAAGATCATCAAGTATCTTCAGAATCACAAAATGATGCCACCAATTCCAATAATTCTTATTCATGTTCACTTAGTGATAATGATGAGAGGGTGCAAGTAGATTGTGGAGACTTGAGGACATTTGAGGACATGCTTGATGAGATGAATGGGGTTGCTAATTGCTTTGAATTTTATGGGCTAGAAAATGATACCAATTCAAATGCTTATTCATATCCTCTAGATAATGATATTGATGATTTGAGGACAATGGATTGGACATTTGAGGATATGTTTGAGGACATGAATGGGGTTGCTAATGGCTCTGATTTTTATGGGCTGCAAAATATGCAATATTCAACTCAACTTTTTGAAGAGGATAATGTGGACCAAATTGAATGTGAAGATACTTTTTCTAATCATTCAATCCTTTGGAGTTGGAACTTTTGA 795 0.3686 MTCSNPTSGINVTTNDHNPNSSNKKIYRGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQEKAARAFDAALYCLRGPHASFNFPNTPLTINVAFHGYQSLSPQEIQEVAARFANESPPKKLTQEEDHQVSSESQNDATNSNNSYSCSLSDNDERVQVDCGDLRTFEDMLDEMNGVANCFEFYGLENDTNSNAYSYPLDNDIDDLRTMDWTFEDMFEDMNGVANGSDFYGLQNMQYSTQLFEEDNVDQIECEDTFSNHSILWSWNF 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00501 264 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Mepo4g00501 264 CDD AP2 25 85 IPR001471 GO:0003700|GO:0006355
Mepo4g00501 264 MobiDBLite consensus disorder prediction 115 148 - -
Mepo4g00501 264 MobiDBLite consensus disorder prediction 131 148 - -
Mepo4g00501 264 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 166 - -
Mepo4g00501 264 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Mepo4g00501 264 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Mepo4g00501 264 MobiDBLite consensus disorder prediction 1 22 - -
Mepo4g00501 264 SUPERFAMILY DNA-binding domain 26 83 IPR016177 GO:0003677
Mepo4g00501 264 Gene3D AP2/ERF domain 26 84 IPR036955 GO:0003700|GO:0006355
Mepo4g00501 264 Pfam AP2 domain 27 75 IPR001471 GO:0003700|GO:0006355
Mepo4g00501 264 FunFam Ethylene-responsive transcription factor 2 25 84 - -
Mepo4g00501 264 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00501 Mepo-Chr4 7181437 7182231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00501 20 151 AP2-EREBP Transcription Factor Family AT1G74930 57.143 1.41e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g00501 AP2 2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00501 - - mtr:25481980 483.411