Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00500 ATGAACACAAATATGACTTGTTCCAATCCTACTGGTAGTATCAATGTCACCACAACTGATCACAACCCTAATAGTAGTAATGATAAGATGTATAGAGGAGTGAGGAAGAGAAAATGGGGAAAATGGGTGTCTGAAATTAGGCTTCCCAATAGTCGTAAGAGAATATGGTTAGGATCACACGACACACAAGAAAAAGCAGCTAGAGCATTTGATGCAGCCCTTTATTGTCTACGTGGTCCTCATGCAAGTTTCAATTTCCCTAATACACCTCTTACCATCAATGTAGCTTTTCATGGTTCCCAATCTCTTTCACCACAAGAGATTCAAGAAGTTGCTGCTAAGTATGCAAATGAGTCACCACCAATTGAGCTCACTCAAGAAGAAGATCATCAAGTATCTTCAGAATCACAAAATGATGCCACCAGTAGCGGCCTAAAAATTCGAGGGTCGCTCGAAGAACGTGAAGTCGCCACCAAAGTTTATTAA 486 0.4053 MNTNMTCSNPTGSINVTTTDHNPNSSNDKMYRGVRKRKWGKWVSEIRLPNSRKRIWLGSHDTQEKAARAFDAALYCLRGPHASFNFPNTPLTINVAFHGSQSLSPQEIQEVAAKYANESPPIELTQEEDHQVSSESQNDATSSGLKIRGSLEEREVATKVY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00500 161 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Mepo4g00500 161 MobiDBLite consensus disorder prediction 117 161 - -
Mepo4g00500 161 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 142 - -
Mepo4g00500 161 FunFam Ethylene-responsive transcription factor 2 29 88 - -
Mepo4g00500 161 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Mepo4g00500 161 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Mepo4g00500 161 CDD AP2 31 89 IPR001471 GO:0003700|GO:0006355
Mepo4g00500 161 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Mepo4g00500 161 MobiDBLite consensus disorder prediction 1 29 - -
Mepo4g00500 161 Pfam AP2 domain 31 79 IPR001471 GO:0003700|GO:0006355
Mepo4g00500 161 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Mepo4g00500 161 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Mepo4g00500 161 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00500 Mepo-Chr4 7164782 7165267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00500 24 132 AP2-EREBP Transcription Factor Family AT1G74930 61.468 1.62e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g00500 AP2 2.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00500 - - mtr:25481980 275.018