Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00499 ATGAACACAAATATGACTTGTTCCAATCCTACTGGTAGTATCAATGTCACAACAACTGATCACAACCCTAATAGTAGTAATAATAAGATGTATAGAGGGGTGAGAAAGAGAAAATGGGGAAAATGGGTATCTGAAATTAGGCTTCCAAATAGTCGTGAGAGAATATGGTTAGGATCATATGACACGCAAGAGAAAGCTGCTAGAGCATTTGATGCAGCCCTATATTGTCTACGTGGTCCTCATGCAAGTTTCAATTTCCCTAATACACCTCTTACCATCAATGTAGCTTTTCATGGTTACCAATCTCTTTCACCAGAAGAGATTCAAGAAGTTGCTGCTAGGTTTGCAAATGAGTCACCACCAATTGAGCTCACTCAAGAAGATGATCAACAAGTACCTTCAGAATCACAAAATGATGCCAATTCCAATCATTCTTATTCATGCCCACTTAATGATAATGATGGGAGGGTGCAAGTAGATTATGGAGACTTGAGGAGAATGGATTGGAGATTTGAGGATATGTTTGATGACTTAAATGGGGTTGCTAATTGCTCTAATTTTTATGGGCAAGAAAATATGCAATACTCAACACAAGTTTTTGAAGAGGATAATGTGGACCAAATAGAATGTGAAGATACTTTTTCTGATCATTCATTCCTTTGGAGTTGGAACTTTTGA 678 0.3746 MNTNMTCSNPTGSINVTTTDHNPNSSNNKMYRGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQEKAARAFDAALYCLRGPHASFNFPNTPLTINVAFHGYQSLSPEEIQEVAARFANESPPIELTQEDDQQVPSESQNDANSNHSYSCPLNDNDGRVQVDYGDLRRMDWRFEDMFDDLNGVANCSNFYGQENMQYSTQVFEEDNVDQIECEDTFSDHSFLWSWNF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00499 225 MobiDBLite consensus disorder prediction 125 152 - -
Mepo4g00499 225 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Mepo4g00499 225 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Mepo4g00499 225 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Mepo4g00499 225 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Mepo4g00499 225 MobiDBLite consensus disorder prediction 125 154 - -
Mepo4g00499 225 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Mepo4g00499 225 CDD AP2 31 89 IPR001471 GO:0003700|GO:0006355
Mepo4g00499 225 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Mepo4g00499 225 Pfam AP2 domain 31 79 IPR001471 GO:0003700|GO:0006355
Mepo4g00499 225 MobiDBLite consensus disorder prediction 1 30 - -
Mepo4g00499 225 FunFam Ethylene-responsive transcription factor 2 29 88 - -
Mepo4g00499 225 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00499 Mepo-Chr4 7148663 7149340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00499 24 193 AP2-EREBP Transcription Factor Family AT1G74930 47.753 2.65e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo4g00499 AP2 2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00499 - - mtr:25481980 382.489