Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00494 ATGACTACTACTAAAAAGATAACATGGAAGTCTATGATCTTGATCCTAAATTGTTACAAGAGTAAATACCCTTTGGAGGAATCAGAGAAACATGTTCTAAAACAAGGTTCTTTTCAAAGACTATGTTTATCAGATATAAGCAATTCAAGTTCAAGTCAAGCTATTGAAGATCTTTCAGTTTCTTTTGCTGGTTCTAAACTTCATGCATTCACACTTGAGGAGCTAAAAGAAGCAACACATAATTTCTCATGGAGTAATATGTTAGGTGAAGGTGGATTTGGACCTGTTTATAAGGGTTTTGTTGATGATAAACTTAGGCAAGGTTTAAAGGCTCAAACCGTAGCTGTTAAATGTTTGGACTTGGATGGTTTGCAAGGTCATAGAGAGTGGCTGGCAGAGATTATATTTCTTGGACAACTAAGTCATCCACATCTTGTGAAGTTAATTGGATATTGTTGTGAAGATGAACACAGGCTTTTGGTGTATGAATACATGCCAAGAGGTAGCTTGGAGAATCAACTATTCAGAAGATACTCTGCTACTATGCCATGGTCAACAAGGATGAAAATTGCACTGGGAGCTGCTAAGGGCTTGGCTTTCCTTCATGAAGCAGATAAACCTGTAATCTATAGGGATTTCAAAGCTTCAAATATCTTGCTAGACTCAGATTATACAGCTAAATTATCAGACTTTGGACTAGCTAAGGATGGTCCTGAAGGAGAAGAGACACATGTAACAACACGCGTAATGGGAACACATGGTTATGCGGCTCCTGAGTACATCATGACAGGTCACCTCACAACAAAGAGTGATGTGTATAGCTATGGAGTAGTTCTGTTGGAATTGCTTACAGGAAAAAGGGTAGTGGATAAGTCTTCAGAATCAAATAGAGGGAAAAACTTGGTGGAATGGGCAAGACCAATGTTGAGAGATCAAAAGAAGCTGCACCGTATCATAGACCGTAGACTTGAAGGTCAATATCCTACCAAAGGAGCTTTGAAAGTTGCTATGTTAGCTTTTAAATGTTTGAGTCATCATCCAAATCCAAGACCATTCATGAGTGATGTTGTTAAGGTTTTGGAACCACTTCAAGATTTTGATGATGTTTTCATAGGACCATTTGTTTATGTTGTAAATGAAAATGGTGACAAAGATACAATATAG 1164 0.3771 MTTTKKITWKSMILILNCYKSKYPLEESEKHVLKQGSFQRLCLSDISNSSSSQAIEDLSVSFAGSKLHAFTLEELKEATHNFSWSNMLGEGGFGPVYKGFVDDKLRQGLKAQTVAVKCLDLDGLQGHREWLAEIIFLGQLSHPHLVKLIGYCCEDEHRLLVYEYMPRGSLENQLFRRYSATMPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVTTRVMGTHGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGKRVVDKSSESNRGKNLVEWARPMLRDQKKLHRIIDRRLEGQYPTKGALKVAMLAFKCLSHHPNPRPFMSDVVKVLEPLQDFDDVFIGPFVYVVNENGDKDTI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00494 387 Gene3D Phosphorylase Kinase; domain 1 43 164 - -
Mepo4g00494 387 FunFam Serine/threonine-protein kinase BIK1 48 164 - -
Mepo4g00494 387 Gene3D Transferase(Phosphotransferase) domain 1 165 370 - -
Mepo4g00494 387 PANTHER OS01G0588500 PROTEIN-RELATED 52 364 - -
Mepo4g00494 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Mepo4g00494 387 CDD STKc_IRAK 88 363 - -
Mepo4g00494 387 Pfam Protein tyrosine and serine/threonine kinase 84 360 IPR001245 GO:0004672|GO:0006468
Mepo4g00494 387 FunFam Probable serine/threonine-protein kinase PBL8 165 374 - -
Mepo4g00494 387 ProSiteProfiles Protein kinase domain profile. 82 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00494 387 SUPERFAMILY Protein kinase-like (PK-like) 59 361 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00494 Mepo-Chr4 7058313 7061406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00494 68 360 Glycoside Hydrolase AT3G07070 52.365 8.13e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo4g00494 PK_Tyr_Ser-Thr 4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00494 - - gmx:100802636 664.84