Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00467 ATGGCATTTGAATTTGGAGTGGTTTTTGTTCTTGTTTTGCTCAGTTGTTTCAATGTCAATTCAGTGGATTCAGATGATGGGTCAACAATGTTAGAGATCAAGAAGTCATTCAGGGATGTGGATAGTGTTTTATATGATTGGACTGACTCACCAACATCAGATTATTGTGCTTGGAGAGGGATTACATGTGATAATGTCACCTTCAATGTTGTTGCACTCAATCTTTCTGGTTTGAATCTTGATGGTGAAATTTCGCCTGCAATAGGGAAACTTCAAAGCTTGGTGTCTATCGATTTAAAACAAAATCGGTTATCAGGTCAGATACCAGACGAGATTGGCGACTGCTCTCTGTTGCAAACCTTGGACTTTTCGTTTAATGAAATACGGGGGGATATACCATTTTCAATCTCTAAGCTGAAACAATTGGAAACTCTGGTTTTGAGGAATAATCAGTTGATTGGACCAATTCCTTCAACATTGTCTCAGATTCCTAACTTGAAATTTTTGGACCTTGCACACAATAATCTTAGTGGTGAAATTCCAAGGCTCTTATACTGGAATGAAGTTTTGCAATATCTGGGCTTGCGAGGGAATAACTTAGTTGGTTCGCTATCTCCGGACATGTGCCAATTAACTGGGTTGTGGTATTTTGATGTGAAAAACAATAGCTTGACAGGAAGTATTCCGGAAAACATAGGCAACTGCACCTCCTTCCAAGTCTTGGATTTATCTTCCAACGAGCTAACCGGAGAGATTCCATTCAATATCGGTTTTCTTCAAATAGCAACCTTGTCATTGCAAGGCAACAATCTTTCTGGACATATTCCACCAGTGCTTGGTCTCATGCAAGCGCTTACTGTGTTAGACTTGAGTTATAACATGCTAACTGGATCAATCCCTCCTATTTTGGGTAATTTGACTTACACAGCAAAATTGTACTTGCATGGAAATAAGCTGACTGGCTTCATCCCTCCGGAGCTTGGAAATATGACACAGCTTAATTATTTGGAACTGAATGATAATCTCCTAAGTGGACATATCCCTCCCGAGCTTGGAAAGCTTACTTCTCTATTTGACTTAAATGTTGCTAACAACAATCTTGAGGGGCCAATTCCCAGTGACCTTAGCTTGTGTACAAGCCTTACCGGCCTAAATGTGCATGGGAATAAGCTGAATGGAACAATACCTGCTACTTTTCATAGCTTGGAGAGTATGACTTCTCTGAATCTTTCGTCAAACAACCTTCAGGGCCCCATTCCAATTGAATTGTCACGGATTGGTAATTTGGATACATTGGATATTTCAAACAACAAAATATCTGGACCAATTCCTTCTTCCCTCGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGTAGAAACAATTTAACAGGACCTATTCCCGCAGAGTTTGGTAATCTCAAAAGTATCATGGAAATCGATCTTTCCCATAACCAACTCTCTCAGATGATTCCTGTAGAACTTGGTCAGCTTCAGAGCATAGCATCATTGAGACTTGAAAACAATGACTTAACTGGGGACGTGACGTCGCTTGTAAATTGTCTTAGTCTCTCTTTGCTTAATGTGTCCTATAACCAGCTAGTTGGTCTTATTCCCACAAGCAACAACTTCACCAGGTTTTCACCTGACAGTTTCATGGGAAACCCGGGTCTTTGTGGTAATTGGCTGAATTCTCCATGTCAAGGTTCTCATCCTACGGAACGTGTTACATTATCTAAGGCAGCTATTCTGGGAATTACTCTTGGTGCCCTTGTAATTCTTCTGATGATACTGCTGGCTGCTTTCCGACCACACCATCCGTCTCCGTTTCCGGATGGATCACTTGAGAAACCAGGCGACAAATCAATTATTTTCTCACCTCCGAAGCTAGTGATTCTTCATATGAACATGGCACTTCATGTGTATGACGATATCATGAGGATGACTGAAAACCTGAGTGAAAAGTATATAGTTGGAAGTGGTGCGTCTAGTACGGTTTATAAATGTGTTCTTAAAAATTGCAAGCCTGTTGCCATAAAGAGGCTCTATTCTCACTATCCGCAATACTTGAAAGAATTTGAGACTGAACTTGCAACAGTCGGCAGCATTAAGCACCGGAATCTGGTCTGTCTCCAAGGCTACTCTTTGTCACCATATGGCCACCTTCTCTTTTATGATTACATGGAAAATGGTAGTCTATGGGATCTTCTTCATGGACCAAGTAAGAAGAAAAAACTTGATTGGCACATGCGTCTGAAAATAGCACTTGGAGCAGCGCAAGGGCTCTCATATTTACACCATGATTGCAGTCCTCGCATCATTCACAGGGATGTGAAATCTTCAAATATTTTACTAGACTCAGATTTTGAGCCGCATCTCACAGATTTTGGCATTGCCAAAAGCCTATGCCCTACAAAGTCCCATACTTCTACTTACATAATGGGCACAATTGGATACATAGACCCTGAGTATGCCAGAACTTCCCGACTCACTGAGAAATCCGATGTCTACAGCTATGGTATTGTTTTGCTTGAATTGCTAACTGGGAGAAAAGCTGTTGACAATGAGTCCAACCTCCATCATCTAATTTTGTCCAAGACAGCTAGCAATGCAGTAATGGAAACGGTTGATCCCGACGTAACTGCCACCTGCAAGGACCTAGGAGCAGTAAAGAAAGTTTTTCAGCTTGCTCTATTATGCACAAAGAGGCAGCCAGCCGATAGACCAACAATGCATGAAGTTTCTCGTGTATTAGGAAGTCTCGTGCCATCAGTCACTCCCGCTAAACAACTAACTCCTCTACAGCCGGCATCTCATCCATCCGCCAAAGTTCCATGCTACATGGATGAGTATGCAAATCTCAAGACACCTCATTTGGTCAACTGTCCTTCCATGAGCACTTCAGATGCTCAACTCTTTCTCAAGTTTGGAGAAGTTATCTCCCAGAACAGTGAGTGA 2958 0.4165 MAFEFGVVFVLVLLSCFNVNSVDSDDGSTMLEIKKSFRDVDSVLYDWTDSPTSDYCAWRGITCDNVTFNVVALNLSGLNLDGEISPAIGKLQSLVSIDLKQNRLSGQIPDEIGDCSLLQTLDFSFNEIRGDIPFSISKLKQLETLVLRNNQLIGPIPSTLSQIPNLKFLDLAHNNLSGEIPRLLYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVKNNSLTGSIPENIGNCTSFQVLDLSSNELTGEIPFNIGFLQIATLSLQGNNLSGHIPPVLGLMQALTVLDLSYNMLTGSIPPILGNLTYTAKLYLHGNKLTGFIPPELGNMTQLNYLELNDNLLSGHIPPELGKLTSLFDLNVANNNLEGPIPSDLSLCTSLTGLNVHGNKLNGTIPATFHSLESMTSLNLSSNNLQGPIPIELSRIGNLDTLDISNNKISGPIPSSLGDLEHLLKLNLSRNNLTGPIPAEFGNLKSIMEIDLSHNQLSQMIPVELGQLQSIASLRLENNDLTGDVTSLVNCLSLSLLNVSYNQLVGLIPTSNNFTRFSPDSFMGNPGLCGNWLNSPCQGSHPTERVTLSKAAILGITLGALVILLMILLAAFRPHHPSPFPDGSLEKPGDKSIIFSPPKLVILHMNMALHVYDDIMRMTENLSEKYIVGSGASSTVYKCVLKNCKPVAIKRLYSHYPQYLKEFETELATVGSIKHRNLVCLQGYSLSPYGHLLFYDYMENGSLWDLLHGPSKKKKLDWHMRLKIALGAAQGLSYLHHDCSPRIIHRDVKSSNILLDSDFEPHLTDFGIAKSLCPTKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTASNAVMETVDPDVTATCKDLGAVKKVFQLALLCTKRQPADRPTMHEVSRVLGSLVPSVTPAKQLTPLQPASHPSAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00467 985 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 298 570 - -
Mepo4g00467 985 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524
Mepo4g00467 985 SUPERFAMILY Protein kinase-like (PK-like) 630 917 IPR011009 -
Mepo4g00467 985 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Mepo4g00467 985 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 624 727 - -
Mepo4g00467 985 SMART serkin_6 652 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00467 985 Gene3D Ribonuclease Inhibitor 262 570 IPR032675 -
Mepo4g00467 985 ProSiteProfiles Protein kinase domain profile. 652 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00467 985 Pfam Protein kinase domain 655 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00467 985 CDD STKc_IRAK 658 921 - -
Mepo4g00467 985 SMART LRR_typ_2 474 498 IPR003591 -
Mepo4g00467 985 SMART LRR_typ_2 330 354 IPR003591 -
Mepo4g00467 985 SMART LRR_typ_2 211 235 IPR003591 -
Mepo4g00467 985 SMART LRR_typ_2 139 162 IPR003591 -
Mepo4g00467 985 SMART LRR_typ_2 163 187 IPR003591 -
Mepo4g00467 985 SMART LRR_typ_2 450 473 IPR003591 -
Mepo4g00467 985 SMART LRR_typ_2 91 115 IPR003591 -
Mepo4g00467 985 SMART LRR_typ_2 282 306 IPR003591 -
Mepo4g00467 985 SMART LRR_typ_2 402 426 IPR003591 -
Mepo4g00467 985 Gene3D Transferase(Phosphotransferase) domain 1 728 930 - -
Mepo4g00467 985 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Mepo4g00467 985 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 188 297 - -
Mepo4g00467 985 Gene3D Ribonuclease Inhibitor 187 261 IPR032675 -
Mepo4g00467 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Mepo4g00467 985 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 728 929 - -
Mepo4g00467 985 SUPERFAMILY L domain-like 257 559 - -
Mepo4g00467 985 Pfam Leucine rich repeat 428 487 IPR001611 GO:0005515
Mepo4g00467 985 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Mepo4g00467 985 PANTHER LEUCINE RICH REPEAT KINASE 2 232 922 - -
Mepo4g00467 985 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 23 187 - -
Mepo4g00467 985 Gene3D Ribonuclease Inhibitor 23 186 IPR032675 -
Mepo4g00467 985 Gene3D Phosphorylase Kinase; domain 1 628 727 - -
Mepo4g00467 985 SUPERFAMILY L domain-like 24 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00467 Mepo-Chr4 6598791 6606889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00467 93 984 Receptor kinase-like Gene Family AT5G07180 64.502 0.0 1124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Mepo4g00467 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00467 K20718 - gmx:100782307 1684.08