Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00421 ATGCCTAAAATGAAGCAACTTCTTCGAAAGCTTCACATCGGTGGTGGCGCTGCTGCTTCTCCAATCAATAATCACAATCCAATCGCAAACGCAAACGTAGCATTGCCACTTTCTCACTCCGATTCTCTCACTACAACTCCTTCTCCTTCTCCATCTCCTTCTCCTTCTCCGACGGTGGTTCAGAATCCCCGAAACGACGGCGCCGGTCTCAACGACTTTAATCTCTTACAGGAAGAAGAGTTTCAGGTTCAATTAGCTCTTGCGATTAGTGCTTCTGATTCCGATCCGAAGGATGTTGATGAATCTGCTCAGATCGATGCTGCTAAACAGATCAGCCTTGGCTATTCTGCTTCTCTTACGGATACTCCTGCACTTGTTCAGTTTCAATCGCTTCGTTATTGGAATTATAATGTCATTGCTTATGATGAGAAAGTGATGGATGGGTTTTATGACGTCTATGGGATCGACGCAAGTTTAATTGAACGTGGAAAGATGCCATTGTTGGTGGATCTGAAAACTGTGCCCACCTCACGAAATGTTGATTATGAAGTAATCTCGGTGAACCGTGTTGTTGATGTCGAGCTAAGTCAGCTTGAGGAAAAAGCCCGTGCCTTGTTTGAAGAGTGTTCTGTTACCGAACTAGGACTGTTTTTGAGTGGCTTAATCCAGAAACTTGCTGATGTTGTTGTTAATAGAATGGGTGGACCAGTTGGTAGTGCTGATAATATCATGACAAAGTGGGCTATGAGGAGCCGTGAATTGCGAGATTCGTTAAGAACTGTCGTCCTTCCTCTTGGCTGTCTAGATGTTGGACTTTCACGTCACCGAGCCCTACTTTTTAAGGTACTTGCCGATAGGATTAATATTCCCTGCATGCTTGTAAAAGGGAGCTATTACACAGGAACTGATGATGGGGCTGTGAATTTGATTAAAGCTGACGATGGAAGTGAATACATTATTGATATGATGGGTGCTCCTGGTACTCTTATTCCTGCTGAGGTGCCCAGCAGTCAGATCCAAAACTATGGTTTTGCTGGTAGGGATTTTGCAGAGATTGCAGGACAACATAACAACTTATATCCAATGCTTGGTGATGAAACTGATGTGCTGGGGGTATTGTCTGATTGTACCGTAGGGAGGGTCCAGACAAAAGAATTAATAAAAATTGGAAGTCAAACAAAACCAGATGAAATAAATCATGCTAAGGTAAATGAAGCAGGGAGATTTAAGCATACAGATGCGTATGGATCCTCATCACATCCAGAGTCATCACATGCAGAAAACATGCATGTAAAAAATGTGTCACAGTATGTTCTCAGTGCCGCAAAGAACCCAGAGTTTGCCTCAAAACTGCACACTATTCTTTTAGAAAGTGGCGCATCACCTCCTTCTGATCTTTTTTCAGATATGAATTCCCGACATAGGGGTTTAGATACTGTTGAAGCTGACCAAAATAGGCTGTTATTAAGTTATGACAAGTCTCTCTTACTCCCTCAAGGAGTGGGCTCTGCTGGTAATACTAGGTTATGTCAAGCGGCAGACCAGTTAACCGAACGGCAAAAAGAATTACACACTGATGCCATTGAATTTTATGATTCTTCGCAAAGTAGTTGTACAAGGAATGCTTTTGCAACTGTTTCCAGTAAAGATAGCGATATTGAGCAGTCTAATCCATTAATTGTTGACTTTGCTTGTCTTAATACACACAAGACATGTAAAGAAAAGTGCCCCGAGTCTTCCTTGCCCAAGACAGTCCTTTCTTGCAAAAGGCATAATGGTGTTGAATGTTTTTGTGATGATGATGAAAGTGGTCCTAGAAATGAGGCTGGAGCTTCTTCGAATAACATTGAACTTGGGAATGATTCAGTCATTCAAATAAACGAGACGGTCATTGGAGATTGTGTCCTATGTGATGACGATAAAACCAAGAAAGTTCACCCAATACTTGGTGAAGACACACAATGGGAAATTCAATGGGAGGATCTTGTCGTTGGCGAGCGTATTGGTATTGGTTCTTACGGTGAAGTTTACCGTGCTGATTGCAATGGCACTGAAGTTGCTGTAAAGAAGTTTTTAGACCAAGACGTCTCAGGCGATGCACTAGATCAGTTCAAATCGGAAATTGAGATTATGCTAAGGCTGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGTCCTCCTCATTTCTCTATCTTGACAGAGTTTCTTCCTAGAGGCAGTTTATATAGGATATTGCATCGTCCCAATCTTGTACTTGATGAGAAGAGGCGGTTGCGTATGGCTCTTGATGTGGCTAAGGGAATGAATTACTTGCACACCAGCCATCCTCCCGTTGTCCATCGAGATTTAAAGACTCCAAACCTTCTTGTTGACAGAAATTGGGTTGTAAAGGTCTGTGATTTTGGTCTGTCACGCATGAAGCACCATACATATTTGTCATCGAAGTCATGTGCTGGAACGCCTGAGTGGATGGCGCCAGAAGTTTTACGCAACGAGCCTGCCAATGAGAAGTGTGATGTATATAGTTTTGGTGTGATCTTGTGGGAGTTAACTACCACGAAAATCCCATGGCATGGCATGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTTCAAAATAAACGTCTTGAGATTCCAGAAGAAATGGATCCCGGAGTAGCTCAAATAATACGTGATTGCTGGCAAACGGAGCCACACTTGCGGCCATCCTTCTCACAGCTGATGTCTCGTCTTTACCGTCTTCGCCAATTGGTTGCCCGTAAAACGGGCTCTACACATTAA 2790 0.4312 MPKMKQLLRKLHIGGGAAASPINNHNPIANANVALPLSHSDSLTTTPSPSPSPSPSPTVVQNPRNDGAGLNDFNLLQEEEFQVQLALAISASDSDPKDVDESAQIDAAKQISLGYSASLTDTPALVQFQSLRYWNYNVIAYDEKVMDGFYDVYGIDASLIERGKMPLLVDLKTVPTSRNVDYEVISVNRVVDVELSQLEEKARALFEECSVTELGLFLSGLIQKLADVVVNRMGGPVGSADNIMTKWAMRSRELRDSLRTVVLPLGCLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGTLIPAEVPSSQIQNYGFAGRDFAEIAGQHNNLYPMLGDETDVLGVLSDCTVGRVQTKELIKIGSQTKPDEINHAKVNEAGRFKHTDAYGSSSHPESSHAENMHVKNVSQYVLSAAKNPEFASKLHTILLESGASPPSDLFSDMNSRHRGLDTVEADQNRLLLSYDKSLLLPQGVGSAGNTRLCQAADQLTERQKELHTDAIEFYDSSQSSCTRNAFATVSSKDSDIEQSNPLIVDFACLNTHKTCKEKCPESSLPKTVLSCKRHNGVECFCDDDESGPRNEAGASSNNIELGNDSVIQINETVIGDCVLCDDDKTKKVHPILGEDTQWEIQWEDLVVGERIGIGSYGEVYRADCNGTEVAVKKFLDQDVSGDALDQFKSEIEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRILHRPNLVLDEKRRLRMALDVAKGMNYLHTSHPPVVHRDLKTPNLLVDRNWVVKVCDFGLSRMKHHTYLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTTKIPWHGMNPMQVVGAVGFQNKRLEIPEEMDPGVAQIIRDCWQTEPHLRPSFSQLMSRLYRLRQLVARKTGSTH 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00421 929 MobiDBLite consensus disorder prediction 39 71 - -
Mepo4g00421 929 FunFam Serine/threonine-protein kinase CTR1 741 924 - -
Mepo4g00421 929 Pfam Protein tyrosine and serine/threonine kinase 663 914 IPR001245 GO:0004672|GO:0006468
Mepo4g00421 929 ProSiteProfiles Protein kinase domain profile. 662 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00421 929 Coils Coil 188 208 - -
Mepo4g00421 929 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 176 926 - -
Mepo4g00421 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Mepo4g00421 929 ProSitePatterns Protein kinases ATP-binding region signature. 668 690 IPR017441 GO:0005524
Mepo4g00421 929 Gene3D Phosphorylase Kinase; domain 1 655 739 - -
Mepo4g00421 929 SUPERFAMILY Protein kinase-like (PK-like) 651 915 IPR011009 -
Mepo4g00421 929 Gene3D Transferase(Phosphotransferase) domain 1 741 926 - -
Mepo4g00421 929 PRINTS Tyrosine kinase catalytic domain signature 822 832 IPR001245 GO:0004672|GO:0006468
Mepo4g00421 929 PRINTS Tyrosine kinase catalytic domain signature 775 793 IPR001245 GO:0004672|GO:0006468
Mepo4g00421 929 PRINTS Tyrosine kinase catalytic domain signature 885 907 IPR001245 GO:0004672|GO:0006468
Mepo4g00421 929 PRINTS Tyrosine kinase catalytic domain signature 736 749 IPR001245 GO:0004672|GO:0006468
Mepo4g00421 929 PRINTS Tyrosine kinase catalytic domain signature 841 863 IPR001245 GO:0004672|GO:0006468
Mepo4g00421 929 FunFam Serine/threonine-protein kinase isoform 1 652 740 - -
Mepo4g00421 929 Pfam Ethylene-responsive protein kinase Le-CTR1 127 330 - -
Mepo4g00421 929 SMART serkin_6 662 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00421 929 CDD STKc_MAP3K-like 668 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00421 Mepo-Chr4 6148937 6158676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00421 610 920 MAP Kinase Kinase Kinase AT5G11850 78.135 2.27e-173 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mepo4g00421 PK_Tyr_Ser-Thr 1.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00421 K04424 - gmx:100779137 1324.3