Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00385 ATGAATTTTGATGATACCTCCAACACATGGCTTCAACTTGATCTTGATCTAGGTCTTGCCCTTCATGATCATTTTGATGACCATAGGAAGAGAGAAAGCAAGAAGACAAGAGTGGAGAATCCACCAAAATGCATTAAGGCTTATCCAATGCTTACATTAGGACCATCAAATGAAGAGGATGAAGACAGCACAAAAATTCAACATTCAACATCAAAGACTGAATCTTGTGATCAAAATTTACCTACTCAATTTACTTCTCCAAACATAGAGTCTTCATTTTCAAATTCCAGTAGCATCAAGAAGGAGAGTGGAGAGGAATTTGAGGTGGAGATAGAAAAGGTGCCAATTACAAGGATAGAAATTGTTGATAAAGATTGTAACCCAAGGAAGAAACTTAGGCTCACAAAAGAACAATCAGAAGTTTTGGAGGAAAACTTTAGAGAGCAATCTACTCTTAATCCGAAGCAAAAGCAAGCATTAGCAAATAAGCTGAATCTGCAGGCTAGACAAGTAGAGGTGTGGTTTCAAAATCGGAGAGCCAGAACAAAGCTGAAACAAACGGAATCTGATTGTGAAGTGTTGAAGAAGTGTTGCGAATCTCTAACAGAGGAGAACAAGAAGTTGCAAAAGGAGCTAGAAGAACTAAAGTCAATGCAAACAGTGGCAGCAGCACCCTTTTATATGAGGATTCCAGCAGCAACACTTACTATCTGCCCTTCGTGTGAGACAATTTGTGGTGGCAACAACAATGACTCCTTACCCTCGACAACATTGCTTATTGGCTCAAAGAATCATTATTTCCATAAAAGTAATAATGATGATAATTATCAATTTCCCCACTCATCATCCGCAGCATGTTAA 861 0.3844 MNFDDTSNTWLQLDLDLGLALHDHFDDHRKRESKKTRVENPPKCIKAYPMLTLGPSNEEDEDSTKIQHSTSKTESCDQNLPTQFTSPNIESSFSNSSSIKKESGEEFEVEIEKVPITRIEIVDKDCNPRKKLRLTKEQSEVLEENFREQSTLNPKQKQALANKLNLQARQVEVWFQNRRARTKLKQTESDCEVLKKCCESLTEENKKLQKELEELKSMQTVAAAPFYMRIPAATLTICPSCETICGGNNNDSLPSTTLLIGSKNHYFHKSNNDDNYQFPHSSSAAC 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00385 286 ProSitePatterns 'Homeobox' domain signature. 160 183 IPR017970 GO:0000981|GO:0006355
Mepo4g00385 286 SMART halz 185 230 IPR003106 GO:0006355|GO:0043565
Mepo4g00385 286 CDD homeodomain 128 186 IPR001356 GO:0003677
Mepo4g00385 286 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 30 250 - -
Mepo4g00385 286 ProSiteProfiles 'Homeobox' domain profile. 125 185 IPR001356 GO:0003677
Mepo4g00385 286 MobiDBLite consensus disorder prediction 50 98 - -
Mepo4g00385 286 Pfam Homeodomain 129 183 IPR001356 GO:0003677
Mepo4g00385 286 SUPERFAMILY Homeodomain-like 126 193 IPR009057 -
Mepo4g00385 286 Pfam Homeobox associated leucine zipper 185 218 IPR003106 GO:0006355|GO:0043565
Mepo4g00385 286 Coils Coil 184 221 - -
Mepo4g00385 286 Gene3D - 124 192 - -
Mepo4g00385 286 MobiDBLite consensus disorder prediction 69 98 - -
Mepo4g00385 286 SMART HOX_1 127 189 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00385 Mepo-Chr4 5731999 5734510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00385 1 244 Homeobox Transcription Factor Family AT4G37790 47.390 7.84e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo4g00385 Homeodomain 6.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00385 K09338 - gmx:100797650 292.352