Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00383 ATGATCCTTACAAAGATGAGAGAAGTTGCAGAAACATATCTAACTTCGTCTGTGAAGAATGCCGTTGTTACTGTGCCTGCATACTTCAATGATTCTCAGCGAAAAGCTACCATAGATGCCGGTGCCATTGCTGGACTTAATGTCATTCAAATAATCAATGAACCTACTGCTGCAGCTATTGCATATGGTTTTGACAAGAGAAGTGAAAGTGATCGTAAACGAAATATATTTGTCTTTGACCTTGGTGGATGTACTTTTGATGTGTCTATCCTTAAAATCAAGGGTGGTGTCTTTGAAGTAAAAGCCACTGCTGGAAACACCCACCTAAGTGGAGAGGACTTTGATAATAGAATGGTGAACTACTTTGTCGAGGAGTTCAAAAAGAAGAATAATGTGGACATTTGTAAGAACCCAAAACCCTTAAGGAGGTTGAGAACTGCTTGCGAGAGGGCAAAGAGGACACTCTCTTTTGCCTTTGTCACCACTGTTGAGGTAGATTTTTTATTTCAGGGAATAGACTTTTCTTCATCTATCACTTGTGCCAAGTTTGAGGAAATTAATATGGAGCTTTTCAACGAGTGTATGAAAACTGTTAAGAGTTGTCTTAGTGATTCAAAGATGCGCGGGAGTGATATTGATGATGTTGTTCTTGTGGGTGGTTCATCGAGGATTCCCAAAGTGCAGGATCTATTGCAAGACTTTTTTAAGCGGAAGGATTTGTGCAAGAGTATCAACCCAGATGAGGCTGTTGCTTATGGTGCAGCTATCCAGGCTGCTATTTTGAGCGAAGGTTTTAAGAATGTCCCAAATTTTGTGCTGCGAGATGTTACCCCATTGTCACTTGGTATCTCAGCTGATGATGATACCATGAGTGTGGTGATTCCTAGAAATACTTCTGTTCCTATCAAGAAGACAAAAGAATATACTACCCGTGAAGATAATTTTGGTGCCTCTGTTGAGGTTTATGAGGGTGAGAGAGCAAGAGCAACAGACAACAATCTGCTTGATAAGAAATTTTTAAGGAAGGCTAAGGTAATGAGTGCATTGGAAACTTGTGTATACAATATCAAGAATGCTTTAAAGAAGAAGGATGTTAATTTAAAGCTCCCTCCTGACGAAAGTGAAAAGATCAACGATGCAATTACCGTGGCCACCAACTGGCTTAATAAGAATAACGAACAGAAAGAAATAGATGTTCTTGAGGATCATCTGAAGGAGCTGGAGAGCATGTTGGAAAAGCTTGAAGTCAAGACTGGCAATGAGAAAAAGCACAAATCTTCTTTATTCAGAAAAGTGCTCAAACATATTACTTAA 1314 0.3942 MILTKMREVAETYLTSSVKNAVVTVPAYFNDSQRKATIDAGAIAGLNVIQIINEPTAAAIAYGFDKRSESDRKRNIFVFDLGGCTFDVSILKIKGGVFEVKATAGNTHLSGEDFDNRMVNYFVEEFKKKNNVDICKNPKPLRRLRTACERAKRTLSFAFVTTVEVDFLFQGIDFSSSITCAKFEEINMELFNECMKTVKSCLSDSKMRGSDIDDVVLVGGSSRIPKVQDLLQDFFKRKDLCKSINPDEAVAYGAAIQAAILSEGFKNVPNFVLRDVTPLSLGISADDDTMSVVIPRNTSVPIKKTKEYTTREDNFGASVEVYEGERARATDNNLLDKKFLRKAKVMSALETCVYNIKNALKKKDVNLKLPPDESEKINDAITVATNWLNKNNEQKEIDVLEDHLKELESMLEKLEVKTGNEKKHKSSLFRKVLKHIT 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00383 437 Pfam Hsp70 protein 1 337 IPR013126 GO:0005524|GO:0140662
Mepo4g00383 437 Gene3D - 67 241 - -
Mepo4g00383 437 PANTHER HEAT SHOCK PROTEIN 70KDA 1 414 IPR013126 GO:0005524|GO:0140662
Mepo4g00383 437 Coils Coil 390 424 - -
Mepo4g00383 437 FunFam Endoplasmic reticulum chaperone BiP 1 74 - -
Mepo4g00383 437 Gene3D - 342 418 IPR029048 -
Mepo4g00383 437 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 347 418 IPR029048 -
Mepo4g00383 437 SUPERFAMILY Actin-like ATPase domain 1 66 IPR043129 -
Mepo4g00383 437 ProSitePatterns Heat shock hsp70 proteins family signature 3. 215 229 IPR018181 -
Mepo4g00383 437 Gene3D - 2 259 - -
Mepo4g00383 437 PRINTS 70kDa heat shock protein signature 21 41 - -
Mepo4g00383 437 PRINTS 70kDa heat shock protein signature 212 228 - -
Mepo4g00383 437 PRINTS 70kDa heat shock protein signature 244 264 - -
Mepo4g00383 437 PRINTS 70kDa heat shock protein signature 270 289 - -
Mepo4g00383 437 PRINTS 70kDa heat shock protein signature 84 94 - -
Mepo4g00383 437 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 267 348 IPR029047 -
Mepo4g00383 437 SUPERFAMILY Actin-like ATPase domain 72 262 IPR043129 -
Mepo4g00383 437 Gene3D Actin; Chain A, domain 4 110 193 - -
Mepo4g00383 437 FunFam Heat shock 70 kDa 110 193 - -
Mepo4g00383 437 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 262 341 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00383 Mepo-Chr4 5708710 5710234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00383 321 410 Calmodulin-binding Proteins AT3G12580 36.667 6.01e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00383 K03283 - gmx:102667578 488.419