Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00382 ATGGGTAGAGCTCCTTGTTGTGACAAAGCAAACGTGAAGAAAGGTCCATGGTCTCCAGAAGAAGATTCTAAACTCAAATCTTACATAGAACAACATGGTACTGGTGGTAACTGGATTGCTCTCCCACAAAAAATTGGCTTGAAGCGTTGTGGAAAGAGTTGTCGTCTCCGGTGGCTAAACTATCTTCGCCCTAATCTCAAACATGGTGGTTTCTCCGAAGAAGAAGATAACATTATTTGCAGCCTTTACATTAGTATTGGAAGCAGGTGGTCGATAATTGCAGCTCAATTGCCAGGAAGAACTGATAATGACATAAAGAACTATTGGAATACAAGGTTGAAAAAGAAGCTTCTTGGGAAACATCGTAAAGATCAACAACAACAAGCACGTAATAGAGGAAATAATGGTGTTATTGTTAAGCAAGAAAGCAATAATAATAGAGTGATGAGTAGTAGTGAATTTTCCTTATCAAATTTGGTTCAAGAACAACCATATTTACCACATGTCATGCAACCTTTGCTATCAACACCCCAACCTCCACCACCATCAATGTTGTCTTACACAAACCAACAAGGCTTCAATGATCAAGATTCTATTAGAAAACTACTTATGAAGCTTGGAGGAAGATTTTCAGGTGATTATCATCCTAATACTACTTTTGATGGTTTGAATCTTCAATTTTCAAATGCTACTTCTTCAACTCATGAACAAGTTTATGATCAAGAACATGTGGGATCTTCTACTTGTGTTACTTCTTCCAATGATAACAATCACAACCAAGTACAATTTGCAACAAATGGTCAATACTTTGACTCGGTGCAAGAAGAACAAGGCAAATTCATTCCAGAAATTGATCATATGGTATCTACTAATTATCCACCAAGATTTGATGGGTTGGAATTCTTTTATGGTGAAGAAGACTTGAATATTGATAATAATAAGATACAAGGTTCTAGCACTAATTGGGGTGAAGCCACCACTTCAAGTTATCATCATCCTCTTGATTCGAAATACCAAGTTTAA 1023 0.3666 MGRAPCCDKANVKKGPWSPEEDSKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKDQQQQARNRGNNGVIVKQESNNNRVMSSSEFSLSNLVQEQPYLPHVMQPLLSTPQPPPPSMLSYTNQQGFNDQDSIRKLLMKLGGRFSGDYHPNTTFDGLNLQFSNATSSTHEQVYDQEHVGSSTCVTSSNDNNHNQVQFATNGQYFDSVQEEQGKFIPEIDHMVSTNYPPRFDGLEFFYGEEDLNIDNNKIQGSSTNWGEATTSSYHHPLDSKYQV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00382 340 FunFam Transcription factor MYB36 70 138 - -
Mepo4g00382 340 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mepo4g00382 340 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mepo4g00382 340 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mepo4g00382 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mepo4g00382 340 CDD SANT 71 113 IPR001005 -
Mepo4g00382 340 Gene3D - 70 140 - -
Mepo4g00382 340 MobiDBLite consensus disorder prediction 118 144 - -
Mepo4g00382 340 Gene3D - 7 68 - -
Mepo4g00382 340 PANTHER OS09G0431300 PROTEIN 1 268 - -
Mepo4g00382 340 MobiDBLite consensus disorder prediction 318 340 - -
Mepo4g00382 340 CDD SANT 16 62 IPR001005 -
Mepo4g00382 340 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mepo4g00382 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mepo4g00382 340 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mepo4g00382 340 SMART sant 67 115 IPR001005 -
Mepo4g00382 340 SMART sant 13 64 IPR001005 -
Mepo4g00382 340 MobiDBLite consensus disorder prediction 129 144 - -
Mepo4g00382 340 FunFam Transcription factor RAX3 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00382 Mepo-Chr4 5687321 5689223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00382 1 205 MYB Transcription Factor Family AT3G49690 62.439 9.96e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g00382 Myb_DNA-binding 2.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00382 K09422 - gmx:100800290 382.104