Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00366 ATGAAGTCCATGATGAATGATAGTAACATGAGTGATGATGGAAACAATCATAACTGGTTAGGATTCTCTCTCTCACCCTACCACATGAAAATGGAGCTTACTTCTTCTGACCCTTCTCAACATCATCATCAAAATCATCATCACTACTATCATCATCATCATGACAATCAACCTCCTTCTTCTGTTGTTCCCTCTAACTTCTACTTGATGTCACCTTCACACCTAAACATGAACAACACTTCTTCATTATGTTATGCTCTTGGAGAAAACAACAATTCCTTTCATTCTTCTTTACCTATGATGCCACTTAAATCTGATGGATCACTTTGCATAATGGAAGAAGCTCTCACTAGATCACAATCTCAAGTGATGATGCCAACTTCATCTCCAAAACTAGAAGACTTCCTTGGTGGTGCAACTATGGGAACTCATAATCATGAATATGAAGGACATGAAAGAGAAACAATGGCTTTATTAAGCTTGGACAGCATCTACTATAACAACAATGCAGAACATGAAACCAATAATAGAGAACATTCTTCTCTTGACCACTCTTCATATTTTTCAGGTTTTTCTTGTCATGGAATGTATCAAAATCCATTAATGGAAGAAGAACAAACCAAGGAAGAAAATATTTATAGCTTCAAAAACTTTGTGGCTCCTAGAGATTATTCTTTGGAGCAACATCATCATCAAGTGAATAATAGTACTGTTGGTAGTATTGGAGATGATGGTTCTGTTGGAACAGTTAATGGTTGTGGAGAGTTACAGACTCTAAGCCTTTCTATGAGTCCTGGTTCTCAATCAAGTTGTATTACTGTTCCAAATCAGATTTCAGCTTCTGGAACTGATTCAGTGGTTGTTGAAGCTAAAAAGAGAGGACATGCTAAGGTTGGACAGAAACAACCTGCTCATAGGAAAACTATTAGCACATTTGGTCAAAGAACTTCTCAGTATAGAGGAGTGACAAGGCATAGATGGACCGGTAGATATGAAGCACATTTATGGGATAACAGTTGCAAGAAGGAAGGGCAAACAAGGAAAGGAAGACAAGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCTTGCTGCTCTCAAATATTGGGGACCTTCAACACATATAAACTTCTCGATTGAAATTTACCAAAATGAACTTGAAGAAATGAATAACATGAATAGGCAGGAATATGTTGCTCATTTGAGAAGAAAGAGTAGTGGTTTTTCAAGGGGTGCTTCAATGTATAGAGGGGTGACAAGGCACCACCAGCATGGTAGATGGCAAGCAAGGATAGGCAGAGTTGCAGGAAATAGGGACCTTTATCTTGGGACATTTAGCACTCAAGAGGAAGCAGCTGAAGCATATGATGTAGCCGCAATCAAATTCCGCGGCCTAAATGCAGTGACAAATTTTGACATGTCCAAATACAATGTTGAAAAAATCATGTCTAGCAACACCTTGCTTGCTGGTGAACAAGCTAGAAGAACAAAGAAGAGTAAAGACAGTAATGAAAAAACTGAGGCCAAAGAGTGTAACAATGTTGTATCAAGTCCAATCATACATAGTCAAGAAGTTGAAGCTGCTGTGACCAACAATGAAAATAATTGGAATCAGTCCCCACAACAAGAGTCAAATACATGTGACCAAAAATTAATTAGAAATTCTGATTTCTCTATGTCCCTACAAGATATCATTGGGATTGATTCAGTAGGAGGATCTAGCCAAGTTATGGTAGATGATTCTTCCAACAAGATGATAAGGACTCATTTTTCAAATTCATCTTCACTTGTGACTAGTTTAAGTAGCTCAAGAGAATGCAGCCCTGACAACAAAAGTACTGGCCCCACAATGCTTTTTCCAAAACCTCCAACAGGGTCAAAAACTTTGAGTCCTATTGCTACTAATGCTGGATCTTGGTTTCCCTCAGCTAGTGCTATTTCAATGTCTCATTTTCCGGTTTTCGCGGCTTGGAGTGATGCTTAG 1992 0.3845 MKSMMNDSNMSDDGNNHNWLGFSLSPYHMKMELTSSDPSQHHHQNHHHYYHHHHDNQPPSSVVPSNFYLMSPSHLNMNNTSSLCYALGENNNSFHSSLPMMPLKSDGSLCIMEEALTRSQSQVMMPTSSPKLEDFLGGATMGTHNHEYEGHERETMALLSLDSIYYNNNAEHETNNREHSSLDHSSYFSGFSCHGMYQNPLMEEEQTKEENIYSFKNFVAPRDYSLEQHHHQVNNSTVGSIGDDGSVGTVNGCGELQTLSLSMSPGSQSSCITVPNQISASGTDSVVVEAKKRGHAKVGQKQPAHRKTISTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFSIEIYQNELEEMNNMNRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNRDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDMSKYNVEKIMSSNTLLAGEQARRTKKSKDSNEKTEAKECNNVVSSPIIHSQEVEAAVTNNENNWNQSPQQESNTCDQKLIRNSDFSMSLQDIIGIDSVGGSSQVMVDDSSNKMIRTHFSNSSSLVTSLSSSRECSPDNKSTGPTMLFPKPPTGSKTLSPIATNAGSWFPSASAISMSHFPVFAAWSDA 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00366 663 PRINTS Ethylene responsive element binding protein signature 319 330 IPR001471 GO:0003700|GO:0006355
Mepo4g00366 663 PRINTS Ethylene responsive element binding protein signature 457 477 IPR001471 GO:0003700|GO:0006355
Mepo4g00366 663 MobiDBLite consensus disorder prediction 33 59 - -
Mepo4g00366 663 Pfam AP2 domain 318 373 IPR001471 GO:0003700|GO:0006355
Mepo4g00366 663 Pfam AP2 domain 418 467 IPR001471 GO:0003700|GO:0006355
Mepo4g00366 663 ProSiteProfiles AP2/ERF domain profile. 417 475 IPR001471 GO:0003700|GO:0006355
Mepo4g00366 663 MobiDBLite consensus disorder prediction 492 513 - -
Mepo4g00366 663 SMART rav1_2 318 387 IPR001471 GO:0003700|GO:0006355
Mepo4g00366 663 SMART rav1_2 417 481 IPR001471 GO:0003700|GO:0006355
Mepo4g00366 663 CDD AP2 416 477 IPR001471 GO:0003700|GO:0006355
Mepo4g00366 663 MobiDBLite consensus disorder prediction 603 622 - -
Mepo4g00366 663 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 122 543 - -
Mepo4g00366 663 Gene3D AP2/ERF domain 317 383 IPR036955 GO:0003700|GO:0006355
Mepo4g00366 663 Gene3D AP2/ERF domain 417 477 IPR036955 GO:0003700|GO:0006355
Mepo4g00366 663 MobiDBLite consensus disorder prediction 496 511 - -
Mepo4g00366 663 SUPERFAMILY DNA-binding domain 416 477 IPR016177 GO:0003677
Mepo4g00366 663 CDD AP2 317 380 IPR001471 GO:0003700|GO:0006355
Mepo4g00366 663 FunFam AP2-like ethylene-responsive transcription factor 416 477 - -
Mepo4g00366 663 FunFam AP2-like ethylene-responsive transcription factor ANT 317 383 - -
Mepo4g00366 663 MobiDBLite consensus disorder prediction 603 633 - -
Mepo4g00366 663 ProSiteProfiles AP2/ERF domain profile. 318 381 IPR001471 GO:0003700|GO:0006355
Mepo4g00366 663 SUPERFAMILY DNA-binding domain 317 383 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00366 Mepo-Chr4 5516547 5520976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00366 12 518 AP2-EREBP Transcription Factor Family AT4G37750 51.381 2.74e-147 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo4g00366 AP2 4.6e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00366 K09285 - gmx:100798179 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00366 4 5516547 5520976 Mepo4g00366 4 5516547 5520976 ECH
Mepo4g00366 4 5516547 5520976 Mepo3g07237 3 86011840 86015686 PCT