Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00357 ATGTCCTTCCATGAAGAGGAATATCCGGTCCGGTTCACGTGTGTTCCGGTTCACGAAACCATGTTCACACAAGGCGAAATAGAGGAGATATTTTCCCTCATTAACCAACCGGTTGATCCATCCAGTCCAGGGTCCGGTTCACAAGGATCAAACCGTGCGGTTTACTCAACCCGCGAGAGAAAAATAAGGAGAATGCAATCAAACCGGGAGTCAGCTAGGCGGTCACGTTGGAGAAAGAAGCGGCACGTAGAGAACCTCACGAACGATTTGAACCGGTTGAGAATGGAAAACCGGGAACTAAAAAACCAGCTAGGGTTAACCATGCAATACAATCTCATATTATCAACGGAGAATGAACGTCTAAGATCAGAATCAATGTCTCTTTTGGCAACACTTTTGGATCTATATCGGACTTTAGAGACAATAATTTCACAATAG 438 0.4475 MSFHEEEYPVRFTCVPVHETMFTQGEIEEIFSLINQPVDPSSPGSGSQGSNRAVYSTRERKIRRMQSNRESARRSRWRKKRHVENLTNDLNRLRMENRELKNQLGLTMQYNLILSTENERLRSESMSLLATLLDLYRTLETIISQ 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00357 145 CDD bZIP_plant_GBF1 61 109 IPR045314 GO:0003700|GO:0006355
Mepo4g00357 145 Pfam bZIP transcription factor 60 105 IPR004827 GO:0003700|GO:0006355
Mepo4g00357 145 MobiDBLite consensus disorder prediction 35 55 - -
Mepo4g00357 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 58 104 IPR004827 GO:0003700|GO:0006355
Mepo4g00357 145 SMART brlzneu 56 120 IPR004827 GO:0003700|GO:0006355
Mepo4g00357 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 44 141 - -
Mepo4g00357 145 Coils Coil 83 103 - -
Mepo4g00357 145 FunFam BZIP transcription factor 58 109 - -
Mepo4g00357 145 SUPERFAMILY Leucine zipper domain 60 114 IPR046347 GO:0003700|GO:0006355
Mepo4g00357 145 Gene3D - 58 111 - -
Mepo4g00357 145 MobiDBLite consensus disorder prediction 35 80 - -
Mepo4g00357 145 MobiDBLite consensus disorder prediction 56 72 - -
Mepo4g00357 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 63 78 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00357 Mepo-Chr4 5395136 5396077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00357 13 139 bZIP Transcription Factor Family AT3G49760 36.567 2.09e-20 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo4g00357 bZIP_1 3.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00357 - - gmx:102668006 183.726