Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00350 ATGTTTGCAAAGATGGTGGAATTATCAAGAAAATTATGGAGAAGGGGAACGGGAATGATCGACCCGGTGATCTTGATGAAGTCCTTGGTAGTCTATCAGCTACTTATACATAATTCTTTTGCTTCCCACATGGCAACAATGAAGTATCAGGTGACACTTGAAGATGGCACTGTTGTTGCAGAAACTCCGGAAGGAGGAGTTGAATTCTATGTGAATGATGGTCATCTTCTTCCTAGATTGCCAAAAGTGATCATGACTATGACAAGGGGGGAGAAAGCTGAATTAATTGTTCAACCTCGGTATGCCTTTGGGGAGAAGGGGAGAGAAGCTGGCAGCGGGTTCCATTCAATTCCACCAGACTCAATGCTCCATATTAATATTGAGTTGGTGTCCTTCAAGCCTGTCATAAATGTTACTGGTGACTCCATGGTGATTAAGAAGATTTTTAAAGAAGGGGAGGGTGCTTTCACAGCTAATGACGGTGCAATTGTTATTGGTAAGAAAGTACTACAAGTATGGTGTTATTTATTGCACAAAGAAAGTAAAAGAGGGAAAGGAAGAAGAAGCCTCAGTTTACTGATTGGTTTTGTTAAAATTGCCATGCCAGTCAGATACACAGCTATGCTAGAAGATGGCACTGTATTCGAGAAAAGAGGAATTGATGAAACACAATCCTTGAAATTTGTAACTGATGAGGAACAAGTGATTACTGGTTTAGACCGAGCAGTGGCAACAATGAAGAAGGGTGAAAGGGCCATAATCAGTATACATCCTGATTATGCTTTTGGAAATGTTGAAGTGAAACAAGATCTTGCTATTGTGCCACCAGGCTCAAAAGTAGTGTATGACATTGAAATGGTGGATTTTATTAAGGAGAAAGCACCATGGGAGTTAAATAGTAATGAGAAAATTGAGGTGGCTGGGAGGAAGAAAGAAGAAGGAAATTTATTATTTAAAAGTGGCAAATATCAGCGAGCAGCGAAGAAGTATGATAAGGCTGCTGATTTTGTTAGCAGAGATGGATCTTTAGGGGATGATGAGGAAAAGTTAGCTAAATCGTTGAGAGTTTCATGCGGGTTGAATGGTGCAGCTTGTTGCCTTAAACTGAATGACTTTCCTGGAGCAATCAAACTATGTACCCAGGTGCTTGATGTTGAATTTCACAATGTGAAAGCTTTGTATAGACGAGCACAAGCATATATAGAGACAGGAGACTTTCTTTTAGCAGATGTAGACATCAAGAAAGCTCTTGAGGTGGATCCACAAAACAGGGAGGTAAAGGTACTAAAGATGAAATTGAAGCAACTTCAAGCTGATAGTGACAAAAAAGATGCTAAACTGTATGAAAGTATGTTTGCACCTAAAACAAAGAGATTGAAGGTTGAGAAAGAAGAGGATGAGGTGGTGAAAATGGAAATGGGCAATGTTGGTGACAGCGCAGCTCCTTCTGATGGTGGTTTAATTTTTTATTCCTGTTGA 1479 0.3989 MFAKMVELSRKLWRRGTGMIDPVILMKSLVVYQLLIHNSFASHMATMKYQVTLEDGTVVAETPEGGVEFYVNDGHLLPRLPKVIMTMTRGEKAELIVQPRYAFGEKGREAGSGFHSIPPDSMLHINIELVSFKPVINVTGDSMVIKKIFKEGEGAFTANDGAIVIGKKVLQVWCYLLHKESKRGKGRRSLSLLIGFVKIAMPVRYTAMLEDGTVFEKRGIDETQSLKFVTDEEQVITGLDRAVATMKKGERAIISIHPDYAFGNVEVKQDLAIVPPGSKVVYDIEMVDFIKEKAPWELNSNEKIEVAGRKKEEGNLLFKSGKYQRAAKKYDKAADFVSRDGSLGDDEEKLAKSLRVSCGLNGAACCLKLNDFPGAIKLCTQVLDVEFHNVKALYRRAQAYIETGDFLLADVDIKKALEVDPQNREVKVLKMKLKQLQADSDKKDAKLYESMFAPKTKRLKVEKEEDEVVKMEMGNVGDSAAPSDGGLIFYSC 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00350 492 Gene3D - 135 292 IPR046357 GO:0003755
Mepo4g00350 492 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 198 290 IPR001179 GO:0003755
Mepo4g00350 492 SUPERFAMILY FKBP-like 23 134 - -
Mepo4g00350 492 Gene3D Tetratricopeptide repeat domain 293 450 IPR011990 GO:0005515
Mepo4g00350 492 SMART tpr_5 390 423 IPR019734 GO:0005515
Mepo4g00350 492 SMART tpr_5 356 389 IPR019734 GO:0005515
Mepo4g00350 492 SMART tpr_5 307 340 IPR019734 GO:0005515
Mepo4g00350 492 ProSiteProfiles TPR repeat profile. 390 423 IPR019734 GO:0005515
Mepo4g00350 492 Coils Coil 426 446 - -
Mepo4g00350 492 Gene3D - 24 133 IPR046357 GO:0003755
Mepo4g00350 492 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 42 133 IPR001179 GO:0003755
Mepo4g00350 492 PANTHER PEPTIDYLPROLYL ISOMERASE 46 134 - -
Mepo4g00350 492 Pfam Tetratricopeptide repeat 391 423 IPR019734 GO:0005515
Mepo4g00350 492 SUPERFAMILY FKBP-like 203 307 - -
Mepo4g00350 492 SUPERFAMILY TPR-like 302 452 IPR011990 GO:0005515
Mepo4g00350 492 FunFam Peptidylprolyl isomerase 295 450 - -
Mepo4g00350 492 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 44 130 IPR001179 GO:0003755
Mepo4g00350 492 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 203 286 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00350 Mepo-Chr4 5297465 5302615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00350 47 453 Calmodulin-binding Proteins AT3G25230 48.284 1.29e-126 378