Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00292 ATGCGTGGATTGCGAAAATTGAAGAGAGTTTCATGGCCTTCCGAATTAGATCTTTGTCAGGTTAGGTTATTCTTATCCGAGGAATCTCCTTCACAAGTTGGGTTGAATTCTCAAGATCACCTCCAAGCAAAGATATCATCCTTGTTGCCTCAAGGAGAAGCTGGTTCTGATGATATTTTACCTCCTGGATTTGAGGGAACTCATGCTTCAAGTCAGTTTAACATTAAGCCGTCCGAAATACCAGTTATTAGCTGGATTAAACCACCTAAGATCGTGCTAGATCTCACATGGCAAGTGGTGGCCGGAGAAGAAAGCAAAGAGATATTTGATCAAGATCAGAGGGAGATGAGAGTCCTTGAAGCTATTTATCCACGAATATCTTCCATTCCTCCAAATCCTATTTCAGTGGACGTTGACGATTCCCATTACATTGATGGTCATATTGTCGTGATCCCAATTACACCTGTTGAAGACGGGGATGTGGGAGCGGATACATTATCTCCTGGTATATTGGATGGTTCAAACACTGTTACGACTATGTCGATGGTGTCTGATGTAGCTGCTGCATCTGTTGCTTTAACTAGCTTAGTGAAGAGCAGTGAACATGGTAATTTGATTGATCCTGAATTACTCAATAATATTCTCAACAATCCGGAAGTGATTGAGAAGTTGGTTAGAAATTATAATGTTCAAAATGCACAGTTTGTACAAAACACCGGATCATCATCAAATGTTTTTTCACATCCTCCTAATCCCTTTAATCAAGTTGAGACCACTACATCCTCATCAAATGCTTTTTCATCCACTTCTTCCTATACTCACACAAGCGGAGGTCAGATGGCGCCAACTATGTCTACTCAATGGCATCGTAGGCCTGAAATCAGTTCAGCTATTGCTGCTACTCCTGTTGAGGTCCCTTCAACAAAAGATGTAAACTACTATAAGAGCTTGATTCAGCAACATGGAGGAGATAAACAAGAAGCACTTCCATACTCCTCCAGTAATCGCCAGAACCAGCAACCATTATCAAACTATGATACAGTACACAATTTTAGAGCAAAAGGATCAAAACCAAAAACGACGAAGCCTTGTATCTTTTTTAATAGTTCCAGAGGATGTCGGAATGGAGCTAACTGTACCTTTCAGCATGATGCATCCTTTCAGCCACAACAAGGTAATCCCTCATCAGGGATGCATAGTTCAAAGAGAATGAAAATGGATAATGAGATCAGCAGTTAA 1239 0.4068 MRGLRKLKRVSWPSELDLCQVRLFLSEESPSQVGLNSQDHLQAKISSLLPQGEAGSDDILPPGFEGTHASSQFNIKPSEIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQDQREMRVLEAIYPRISSIPPNPISVDVDDSHYIDGHIVVIPITPVEDGDVGADTLSPGILDGSNTVTTMSMVSDVAAASVALTSLVKSSEHGNLIDPELLNNILNNPEVIEKLVRNYNVQNAQFVQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTSGGQMAPTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQPLSNYDTVHNFRAKGSKPKTTKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMHSSKRMKMDNEISS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00292 412 MobiDBLite consensus disorder prediction 384 412 - -
Mepo4g00292 412 ProSiteProfiles Zinc finger C3H1-type profile. 358 386 IPR000571 GO:0046872
Mepo4g00292 412 MobiDBLite consensus disorder prediction 384 401 - -
Mepo4g00292 412 MobiDBLite consensus disorder prediction 326 344 - -
Mepo4g00292 412 SUPERFAMILY CCCH zinc finger 363 385 IPR036855 GO:0046872
Mepo4g00292 412 MobiDBLite consensus disorder prediction 324 344 - -
Mepo4g00292 412 MobiDBLite consensus disorder prediction 256 283 - -
Mepo4g00292 412 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 3 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00292 Mepo-Chr4 4521196 4526349 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo4g00292 zf-CCCH 8.8e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00292 - - cam:101501814 593.578