Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00236 ATGGCTCACAATTCTCGATCAAGTAAAAATTTCATACCTACAGATGGTGAACTTCTTCGATCATTCCTCTACAATAAAGTTCACCATATACCAGTGCCCAACTATATCAATGTTCTTGAATATGATTTATATGGTACCATAAAGAATCCTTGGGAGATTTGGGAAGAGTTTGCGAGTTCTCACTCATATCATGGAAAAGACTTATATTTCTTCACTACCTTAAAGAAGAAATCTCCCACTAGTAAACGTTTGATTCGCACTATTGGAATTGGTACATGGGAAGCCGAAGACACCGGAAAAAGTATAGTTAACAAAGAGAACCAAACCCTAGGTCTAAAAAAACGTTTCCGCTTTGAGAAGAGTAACACTTCTCAAGATGGTGGATGGATCTTGCATGAATATAGCCTTCATATATCTTTGATTAACAATGCTTCGGCCAGCAATTATGTTCTATGCAGATTCAGAAAGAATTTGAAACCCATTCCAAAAAATACAGGAAAAAGAATCGATGACCAATCAAATTCTCACTTAATGAATAGCATTGGACAAGATAGGCAAGGAAAGACGGTTGTTCCCGGACCTGCGGACATCAATGTTTCGAGGAAACTTGTTCATGAAGAACCAAAATGTCAATCAAATGGTGGACACAAAAGGAGAAAGGTGGGAAATACTTTGCCAGAAAAGACCGTGGTTCTTGGGCTTAAAGCTATCACTAATATTGAGAACAATGATGTTTGGTTGGGGGAAAATATTGACCCATATTCAAGAAATCAACTTGATAGTGGAAATATCAAGACTGACGTGGTTAAAAGTACCAATACAACAGAGGCAAAATTTAACAAAGAAGATGGTGATCATATTGTAAACAAAGATGAAGATGGTGATATCTCTTGGTCTGAGCTTTTAGCAAGGCAACTCCTAGAGGCGAATGAAGGAAGCTTAATCGAAGAGGAGGATATTGAAATGATTCCTAATTTTGGCAAACATTGCTATGTTTAA 999 0.3714 MAHNSRSSKNFIPTDGELLRSFLYNKVHHIPVPNYINVLEYDLYGTIKNPWEIWEEFASSHSYHGKDLYFFTTLKKKSPTSKRLIRTIGIGTWEAEDTGKSIVNKENQTLGLKKRFRFEKSNTSQDGGWILHEYSLHISLINNASASNYVLCRFRKNLKPIPKNTGKRIDDQSNSHLMNSIGQDRQGKTVVPGPADINVSRKLVHEEPKCQSNGGHKRRKVGNTLPEKTVVLGLKAITNIENNDVWLGENIDPYSRNQLDSGNIKTDVVKSTNTTEAKFNKEDGDHIVNKDEDGDISWSELLARQLLEANEGSLIEEEDIEMIPNFGKHCYV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00236 332 Gene3D NAC domain 14 159 IPR036093 GO:0003677|GO:0006355
Mepo4g00236 332 PANTHER NAC TRANSCRIPTION FACTOR 56 11 179 - -
Mepo4g00236 332 Pfam No apical meristem (NAM) protein 10 136 IPR003441 GO:0003677|GO:0006355
Mepo4g00236 332 SUPERFAMILY NAC domain 10 155 IPR036093 GO:0003677|GO:0006355
Mepo4g00236 332 ProSiteProfiles NAC domain profile. 5 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00236 Mepo-Chr4 3873287 3876421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00236 11 169 NAC Transcription Factor Family AT5G62380 32.099 7.39e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo4g00236 NAM 3.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00236 - - mtr:11433340 369.392