Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00225 ATGAGAGAAACACACTCCAGCCAAGAGGGAAAGGGGAAGAGTGTGAGAAGCTATCAAAGCAATAAGGTAGCAACTAGGTTTAGTTTTCAAGAGCTTTCAATGGTGACCGGAGGTTTTAAGGAACCGATAGGCGAAGGTGGTTTTGGAAGAGTTTACAAGGGTTGTCTCCCAACCGGCGAGCTTGTTGCTGTGAAACAGTTAGATCCTAAAGGTCATCAAGGTTGTCAGGAATTTCTGACCGAGGTTCTTATGCTATGCGTGTTGCGTCATTCTAATTATCTTATTAAGTTAATTGGCTATTGCAGCAGTATAGATCAAAAGCTTTTGGTTTATGAATACATGCCTAAGGGATGTCTTGAAGATCATCTTTTTGATCTTACCCGAGACAAAGTACCTCTAAGCTGGAGATCTCGAATGAAGATTGCTGTTGGAGCAGCTCGGGGTCTTGAGTATCTCCATTGTAATGCTGAACCGTCTGTTATCTATCGAGACATGAAATCTGCCAACATTTTATTGGACAATGACTTCAACGCAAAACTGTCCGATTTTGGTCTTGCAAAATTAGGACCCACTGGAGACAACACTCATGTTGAAACCAGAGTGATGGGTACTGAAGGCTACTGCGCACCAGAATATGCGAACACTGGCAAATTAACTCAACAATCTGATATCTACAGTTTCGGTATGGTTTTGCTTGAGTTGATCACCGGACGTAGAGCACTAGATAATAGTAGAAGAGCAGGAGAGCGACACTTAATGTCATGGTCTCGCCCATATTTTGATGGCCGGAGAAAGTATGAACATATGGTTGACCCTCTTTTGCAAGGACACTTCCCCCTCCGCAGTTTGCATCAGATGATTTATATGACTGCTAGGTGTCTCCGGGAGGAACCAAAATCCCGTCCACTCATTGGTGAAATTGTTGTCTTACTGGAATTCCTAGCTTCTCAGAGTTACCCCTGA 963 0.4341 MRETHSSQEGKGKSVRSYQSNKVATRFSFQELSMVTGGFKEPIGEGGFGRVYKGCLPTGELVAVKQLDPKGHQGCQEFLTEVLMLCVLRHSNYLIKLIGYCSSIDQKLLVYEYMPKGCLEDHLFDLTRDKVPLSWRSRMKIAVGAARGLEYLHCNAEPSVIYRDMKSANILLDNDFNAKLSDFGLAKLGPTGDNTHVETRVMGTEGYCAPEYANTGKLTQQSDIYSFGMVLLELITGRRALDNSRRAGERHLMSWSRPYFDGRRKYEHMVDPLLQGHFPLRSLHQMIYMTARCLREEPKSRPLIGEIVVLLEFLASQSYP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00225 320 SUPERFAMILY Protein kinase-like (PK-like) 15 314 IPR011009 -
Mepo4g00225 320 ProSitePatterns Protein kinases ATP-binding region signature. 43 65 IPR017441 GO:0005524
Mepo4g00225 320 CDD STKc_IRAK 43 312 - -
Mepo4g00225 320 FunFam serine/threonine-protein kinase PBS1-like 4 113 - -
Mepo4g00225 320 FunFam Serine/threonine-protein kinase PBS1 114 320 - -
Mepo4g00225 320 PANTHER OS07G0668900 PROTEIN 12 319 - -
Mepo4g00225 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Mepo4g00225 320 ProSiteProfiles Protein kinase domain profile. 37 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00225 320 Gene3D Transferase(Phosphotransferase) domain 1 114 317 - -
Mepo4g00225 320 Gene3D Phosphorylase Kinase; domain 1 2 113 - -
Mepo4g00225 320 PIRSF ILK 6 319 - -
Mepo4g00225 320 SMART serkin_6 37 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00225 320 Pfam Protein kinase domain 40 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00225 Mepo-Chr4 3698222 3701663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00225 3 316 Glycoside Hydrolase AT3G07070 55.836 1.52e-125 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo4g00225 Pkinase 9.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00225 - - gmx:100796595 427.557