Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00210 ATGAGTAGCGCTTCAAGCGAAGACTATGGTGATCACAAAACTGACATATTGAGAGTCATGAATAGCGCTTCAAGCGAAGATGATGGCGATCACAAAACTGGCATATTGAGTGTTATGAGTAGCCCTTCAAGCGGCGATGATGATCGCAAAAGGCCGTCAATACTATCAGCTGATCAAGAAACTGATGAAGGAGATACAACTGGTGGAGAAGGAGGAGAAGGCAGTCTAAAGAAAGGTCCATGGACAGCGGCAGAGGATGAAATCTTGGTAGCTCATGTTCAAAAATACGGTGAGGGAAATTGGAACACTGTCCGGAAGTGTACCGGACTTGCTCGCTGTGGGAAAAGCTGTCGACTGCGATGGGCAAATCATTTGAGACCTGATCTCAGAAAGGGTGCAATTACTGCTGAAGAAGAACGCCGAATCATTGAGTTGCATCATAAGATGGGAAATAAATGGGCTCAAATGGCTGCACTGTTGCCTGGACGCACAGATAATGAGATAAAGAACTTTTGGAACACAAGATGCAAGAAACGGGGTCGAGCAAACTTGCCAATTTACCCTGAAGATTTATCATCCGAATGTCTGTTGAATGGCAATCAAGAAAATGCTGACATGTTGACAGATGAAGCCAGCCAGCATGATGAAGCAGAGAACAAAGTACCTGAAGTGATATTTAAAGATTACAAACTCCGCCCTGATATTTTACCACCATGTTTTGATAAGCTTCTAGCTGGCTTGTTACTGCGTCCCTCAAAGCGCCCTTGGAAGTCCGATATGAATTTGTACAGTTATAGCAATAATGTTGCTGCCCCAGCAGCATTTGATCAGTACAGAAAATATCCTATGTCGTCTCCTTCGTCTTCTCCATGGGAGGATATTGAACCAAATAGCTGCAATCAGTTTTATGAATATGATAACACTGTGGTTGGTATTCACGCCACACCAAAAACCTCTTCTTTTGAGCCCATATATGGGTTCATGAAGACTGAGCCCCCTTCACTCCAATATTCACGGACTCAACATCCTAGCTATATGATTCAATATCCTCCAGTTGAGCCTGTTCAGTCAATTCCAACTTCTCTAGAGAGGAGTCATTTACTTCCACCCAATGAAGCAAATCTTAGCACACAATGGGATGAGTCAGATGATCAGTATGATGGTTTATTTCCGTCCTTTGACTATAATAATAATAATCATATGAACATGTGCTCAACTGATGGGCACCACTCAGCTGAAACTACGCAGGGTCATGATATTATTAACCATGCTGCATTTAATCAGATCCCAGATTACTTTTCTTCTGAGAGAGATGATTTGAGGAGAAAAATATTTGCGCATCCAGATGCTGCGCCTGTGGTTGATGACTTGGCTTGTGCGACTTTGAGTATTAAAGTGTGTATGGGTGGATGA 1413 0.4282 MSSASSEDYGDHKTDILRVMNSASSEDDGDHKTGILSVMSSPSSGDDDRKRPSILSADQETDEGDTTGGEGGEGSLKKGPWTAAEDEILVAHVQKYGEGNWNTVRKCTGLARCGKSCRLRWANHLRPDLRKGAITAEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGRANLPIYPEDLSSECLLNGNQENADMLTDEASQHDEAENKVPEVIFKDYKLRPDILPPCFDKLLAGLLLRPSKRPWKSDMNLYSYSNNVAAPAAFDQYRKYPMSSPSSSPWEDIEPNSCNQFYEYDNTVVGIHATPKTSSFEPIYGFMKTEPPSLQYSRTQHPSYMIQYPPVEPVQSIPTSLERSHLLPPNEANLSTQWDESDDQYDGLFPSFDYNNNNHMNMCSTDGHHSAETTQGHDIINHAAFNQIPDYFSSERDDLRRKIFAHPDAAPVVDDLACATLSIKVCMGG 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00210 470 ProSiteProfiles Myb-like domain profile. 126 176 IPR001005 -
Mepo4g00210 470 MobiDBLite consensus disorder prediction 1 79 - -
Mepo4g00210 470 CDD SANT 135 174 IPR001005 -
Mepo4g00210 470 CDD SANT 80 125 IPR001005 -
Mepo4g00210 470 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Mepo4g00210 470 Pfam Myb-like DNA-binding domain 81 140 - -
Mepo4g00210 470 ProSiteProfiles Myb-like domain profile. 73 125 IPR001005 -
Mepo4g00210 470 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 60 404 - -
Mepo4g00210 470 SUPERFAMILY Homeodomain-like 76 172 IPR009057 -
Mepo4g00210 470 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 180 IPR017930 -
Mepo4g00210 470 Gene3D - 77 130 - -
Mepo4g00210 470 SMART sant 130 178 IPR001005 -
Mepo4g00210 470 SMART sant 77 127 IPR001005 -
Mepo4g00210 470 MobiDBLite consensus disorder prediction 44 58 - -
Mepo4g00210 470 Gene3D - 133 214 - -
Mepo4g00210 470 FunFam MYB-related transcription factor 77 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00210 Mepo-Chr4 3532848 3536255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00210 64 192 MYB Transcription Factor Family AT4G26930 69.767 3.60e-60 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g00210 Myb_DNA-bind_6 2.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00210 K09422 - gmx:100800658 311.612