Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00198 ATGGATGAACTCGGCTGTAGCATTGTGGTGATGAATGGCTCACAGCCTAAAGTCCTCAGACTTAATTTAGGAGGACCCTCCAATGAACTCCAAACTCCATTTTTCTCTGCTCCCTCTTCACCAGGTATAGAAATTGGAAAGTTAAAAGGCCGCAGATTGAAGCATTCCACCCCAGTTGGTAGCCCCGAAGAAACAGGTTCTTCTGTTACAAAAAGTATTGGAGTAGATTCAGTGTCAAGTTCAGACTCAATGACTTCTCCTTTCCTGGTCTATAAAGAAAACCCTCTGTATGAGGGTCACGGATCACAAAAAAGAACAAACAAACCAACCAACGAGCCAAAGAATTTCAACTTCAAGCCACCTTTGTACTGTAATTTGGAAAGGGATAGCCCTCCCCCTTCAAGGAAACTCCCAACATTATCTCTGGCTAGTGATAAGAACACGGAATTTTGGATCCATCAGAACCATATTAATAATGAGAAGCTTCAAAGAGCTGAAAATAAACTTATTCAAAGAACTAAATCTCCAAATTCTAAAACTTTACTTGAGAATTTTTTACACTGTGATCAAGAGAAGAGAACAAATGAACTCGAGTTTAACAAAGCTGAAAGTAGAAGTTATGTCACTAGCCCAAGCATCAGAGAAAGTCCTATTCCTTTGGGTAGAAATTCCTCTATACCTCCCCCCTTGTGCTCACAGTGTCAGAATATAGCACCTGTATTTGGAAATCCTCCGAGACGGTTTTCTTATAGAGAGATAGCAGAAGCTACTGACATGTTCTCAGATTTAAATTTTTTGGCTGAAGGTGGATTTGGTGTGGTTCACAAAGGAATACTCAAAGATGGCCAAGTTGTTGCAGTGAAACAATTAAAATTTAGCGGCTCTCAAGCAGATCTTGATTTCTGCAGGGAAGTTCGGCTTTTGAGTTGCGCACAACACAGAAATGTTGTATTGCTAATAGGATTTTGCACAGAAGAAAGTGTGAGGATATTAGTCTATGAGTATATATGTAATGGAACCTTAGACCTCTGCTTACATGGCAGAGATAGTATACCTTTGGATTGGAACTCGCGGTTAAAGATAGCGATTGGAGTTGCACGAGGCTTACGCTACCTCCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGATATTAGACCCAAAAATATCCTCTTAACCCATGACTTTGAACCTCTAGTGGCTGATTTTGGGCTTGCTAGATGGCAATCAGAATGGAATATAAATACAGAAGATCGAGTTATGGGAACTTCAGGGTACATTGCTCCGGAGTATCTTGATGCTGGAATTCTTACGTGTAAAGTAGATGTATATGCATTTGGAATTGTTTTATTAGAGTTAATGACAGGTCGAAAAATTAGCGAGTTGGAACAGTTCAATGGACATTCATATCTTTCTGAATGGTTTCACCCCCTACACATGTTGGATTCCAATCACATCTTACAAAACGTTGGATCTCTCAACCCATGGTTGGATTCTGAAGGGTCACTAGAATTTAATCTTCAATTGAAAGCCATGGCACAAGCTGCTTCATTGTGCCTACGTTTGGACCCCGACTCCAGACCCCCAATATCAAAGATCCTCAGAGTGCTGGAAGGGGGCAATCCAGTTCGTTCTTTGGGTTTAGACATCAATTCAGTTGGTAACATAAGTGGTCGTTTAAGTGGTTTGAGTTCGCATACTCCTCCTAAAGGTACAATAAGCCATTCTCGCATGTTATCACATTGA 1749 0.4059 MDELGCSIVVMNGSQPKVLRLNLGGPSNELQTPFFSAPSSPGIEIGKLKGRRLKHSTPVGSPEETGSSVTKSIGVDSVSSSDSMTSPFLVYKENPLYEGHGSQKRTNKPTNEPKNFNFKPPLYCNLERDSPPPSRKLPTLSLASDKNTEFWIHQNHINNEKLQRAENKLIQRTKSPNSKTLLENFLHCDQEKRTNELEFNKAESRSYVTSPSIRESPIPLGRNSSIPPPLCSQCQNIAPVFGNPPRRFSYREIAEATDMFSDLNFLAEGGFGVVHKGILKDGQVVAVKQLKFSGSQADLDFCREVRLLSCAQHRNVVLLIGFCTEESVRILVYEYICNGTLDLCLHGRDSIPLDWNSRLKIAIGVARGLRYLHEDCRVGCIVHRDIRPKNILLTHDFEPLVADFGLARWQSEWNINTEDRVMGTSGYIAPEYLDAGILTCKVDVYAFGIVLLELMTGRKISELEQFNGHSYLSEWFHPLHMLDSNHILQNVGSLNPWLDSEGSLEFNLQLKAMAQAASLCLRLDPDSRPPISKILRVLEGGNPVRSLGLDINSVGNISGRLSGLSSHTPPKGTISHSRMLSH 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00198 582 ProSiteProfiles Protein kinase domain profile. 260 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00198 582 FunFam Os07g0541700 protein 336 424 - -
Mepo4g00198 582 PANTHER OS01G0750732 PROTEIN 183 542 - -
Mepo4g00198 582 MobiDBLite consensus disorder prediction 50 84 - -
Mepo4g00198 582 SMART tyrkin_6 260 538 IPR020635 GO:0004713|GO:0006468
Mepo4g00198 582 MobiDBLite consensus disorder prediction 60 84 - -
Mepo4g00198 582 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 232 335 - -
Mepo4g00198 582 MobiDBLite consensus disorder prediction 562 582 - -
Mepo4g00198 582 ProSitePatterns Tyrosine protein kinases specific active-site signature. 381 393 IPR008266 GO:0004672|GO:0006468
Mepo4g00198 582 SUPERFAMILY Protein kinase-like (PK-like) 240 538 IPR011009 -
Mepo4g00198 582 Gene3D Transferase(Phosphotransferase) domain 1 336 545 - -
Mepo4g00198 582 Pfam Protein tyrosine and serine/threonine kinase 266 479 IPR001245 GO:0004672|GO:0006468
Mepo4g00198 582 Gene3D Phosphorylase Kinase; domain 1 234 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00198 Mepo-Chr4 3360330 3362848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00198 207 539 Trihelix Transcription Factor Family AT5G38560 41.261 4.84e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mepo4g00198 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00198 - - gmx:100813141 904.82