Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00195 ATGGCTATTCCTTCCTTACTTTGCTCTCTCCAAATTCTCCTAATCATAATTTTCACTTCTCAAACCAAAGCTGAGGTTGTATACGATGAAATCAATTTATACCACTACGTTTGTGATCAAGAAAACAATAGAGGTAACTACACAACAAATAGCACCTATGACAAAAACCTCAACACACTTTTATCTACTCTCACTTCCAACACAGAAATCAACTACGGTTTCTACAATTTTTCACACGGCGAAAACAGCGACAAAGTCTACGCAATTGGACTATGCCGAGGGGATATTATGCCGAATAATTGTCGCAGTTGCCTCGGAAGCGCCAGAACAAATCTTACACGTAGTTGTCCAAATCGAAAAGAGGCTATTTTTTGGTCTGAAGATGAAAAATGCATGTTGCGTTATTCGGACCGATTGATATTAGGTGTAATGGAAGATATTCCTATGTTTTCTTCAAATAATGAAAATAATTCAAGTGATGTTGATTTGTCTAATGAAGTTGTTACTACTTTGTTGAATAATTTAACAAGTAGAGCTGTGAAAGGTGATTCTAGGCTTAAATATGCTGCAGGTAGTCAACCTGGTCCTCAGTATGAAGTTATATATGGTTTGGTTCAATGTACACCTGATTTGTCTGAAACGGATTGTAATTCATGTTTGGTTGAGAATCTTCAACAAATTCCTAGTTGTTGTAATAATAAGATTGGTGGAAGAGTTGTTAGGCCTAGTTGTAACATGAGATTTGAAACTTCTTACCTTTTTTATGAGCCTAGAGCATCACCACCCCCGCCGCCGCCATCTCCTCCACCACCCAATACCAATGGTAATACTTCATCACAAGGAAAAAGCAACAGTGGTTCTACCATTGGCATCGCTGTAGGAGTACCAGCTGCTCTTGTTGCTATGGTCTTCATTTTTATTTGCATTTATTTAAGAGTAAGGAAGCCAAAGAAACGGTTTGAAGAAATTCAAGAAGAAGAAGATGATGAAGAAGCTCAAATTGAAAGTCCTGAGCCACTACAACTCAACTTCAACACCATACGTAATGCTACAAATGACTTCTCAAATTCTAATCAACTTGGAGAAGGAGGATTCGGGGTTGTTTACAAAGGTAAGCTATCCAATGGACAAGAGATTGCTGTCAAAAGGTTGTCAATGAGTTCAGGACAAGGAGATTCAGAATTTAAGAATGAGGTGCTTTTGGTGGCTAAGCTTCAACACCGAAATTTAGTGAGACTACTCGGTTTCTCACTAGAAGGGAGAGAAAGAGTACTTGTATATGAATTTGTTCAAAACAAAAGTCTTGATTATTTCATTTTTGATCAAGTTAAGAAAGCGCAGTTAAATTGGGAAATGCGCTACAAAATCATTTTAGGTATTGCTCGAGGCATTCTTTACCTTCACGAGGATTCTCGACTGCGCATTATTCATCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGAAGAAATGAATCCTAAGATATCTGATTTTGGCATGGCAAGACTATTTGGTGTGGACCAAACACAGGAAAACACAAAAAGAATTGTTGGAACCTATGGATATATGGCACCTGAATATGCTATGCACGGACAATTTTCAGTGAAGTCAGATGTATTCAGTTTCGGTATATTGGTTCTTGAAATTGTAAGTGGTTCAAAAAACAGTGGCATTCGCGATGAGGAGAATACAGAGTATCTATCGAGCTTTGCATGGAGGAATTGGAAGGAGGGAACTGCAACAAGTATCATAGATCCAACATTAAATAGTGATTCACGAAATGACATATTGAGATGTATCCATATTGGATTACTTTGTGTTCAAGAGAATGTAGCTAGCAGACCAACCATGGCTACTGTTGTAGTGATGCTTAATAGTGATTCTGTTACTCTCCCAATGCCTTTGGAACCTGCATTTCATATGGATAGCAGAAACCTTCAAGATATGAAATCATGGGGTCATAGTTCAGCTCAAGAATCAGTCAATGGGGCATCAAATACAGAGCTATATCCTCGGTAG 2019 0.3809 MAIPSLLCSLQILLIIIFTSQTKAEVVYDEINLYHYVCDQENNRGNYTTNSTYDKNLNTLLSTLTSNTEINYGFYNFSHGENSDKVYAIGLCRGDIMPNNCRSCLGSARTNLTRSCPNRKEAIFWSEDEKCMLRYSDRLILGVMEDIPMFSSNNENNSSDVDLSNEVVTTLLNNLTSRAVKGDSRLKYAAGSQPGPQYEVIYGLVQCTPDLSETDCNSCLVENLQQIPSCCNNKIGGRVVRPSCNMRFETSYLFYEPRASPPPPPPSPPPPNTNGNTSSQGKSNSGSTIGIAVGVPAALVAMVFIFICIYLRVRKPKKRFEEIQEEEDDEEAQIESPEPLQLNFNTIRNATNDFSNSNQLGEGGFGVVYKGKLSNGQEIAVKRLSMSSGQGDSEFKNEVLLVAKLQHRNLVRLLGFSLEGRERVLVYEFVQNKSLDYFIFDQVKKAQLNWEMRYKIILGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFGVDQTQENTKRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVLEIVSGSKNSGIRDEENTEYLSSFAWRNWKEGTATSIIDPTLNSDSRNDILRCIHIGLLCVQENVASRPTMATVVVMLNSDSVTLPMPLEPAFHMDSRNLQDMKSWGHSSAQESVNGASNTELYPR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00195 672 Pfam Salt stress response/antifungal 162 250 IPR002902 -
Mepo4g00195 672 Pfam Salt stress response/antifungal 38 137 IPR002902 -
Mepo4g00195 672 SUPERFAMILY Protein kinase-like (PK-like) 339 655 IPR011009 -
Mepo4g00195 672 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 665 - -
Mepo4g00195 672 SMART serkin_6 354 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00195 672 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 140 - -
Mepo4g00195 672 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Mepo4g00195 672 Gene3D Transferase(Phosphotransferase) domain 1 430 631 - -
Mepo4g00195 672 FunFam Cysteine-rich receptor-like protein kinase 10 315 429 - -
Mepo4g00195 672 FunFam Cysteine-rich receptor-like protein kinase 28 430 632 - -
Mepo4g00195 672 FunFam Cysteine-rich receptor-like protein kinase 10 148 253 - -
Mepo4g00195 672 CDD STKc_IRAK 360 625 - -
Mepo4g00195 672 Gene3D - 34 139 IPR038408 -
Mepo4g00195 672 Gene3D - 147 252 IPR038408 -
Mepo4g00195 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Mepo4g00195 672 Pfam Protein tyrosine and serine/threonine kinase 357 622 IPR001245 GO:0004672|GO:0006468
Mepo4g00195 672 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Mepo4g00195 672 ProSiteProfiles Protein kinase domain profile. 354 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00195 672 MobiDBLite consensus disorder prediction 257 273 - -
Mepo4g00195 672 MobiDBLite consensus disorder prediction 651 672 - -
Mepo4g00195 672 MobiDBLite consensus disorder prediction 255 285 - -
Mepo4g00195 672 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Mepo4g00195 672 Gene3D Phosphorylase Kinase; domain 1 315 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00195 Mepo-Chr4 3322345 3325789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00195 43 672 Receptor kinase-like Gene Family AT4G21410 52.403 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g00195 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00195 - - lang:109335396 795.038