Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00194 ATGGTGGTCTTAGTGAATAGAAAAAGCAATAAAAGTACTACTATTGGCATCGCTGTAGGAGTACCAATTGCTCTTGTTCTTATGGTCTTCATTTTTATCTGCATTTATTTAAGAGTGAGGAAGCCAGATAAAAGATTTGAAGAAGTTCAAGAAGAAGAAGAAGAAGAAGACAAAATTGATATTACTACCGAGCAACTGCAATTCGACTTCAACACCATACATCAAGCAAAGAGAGTGCAATTAAATTGGGAAAGGCGCTACAAAATTGTTTTAGGTATTGCTCGTGGCATTCTGTACCTTTACGAGGATTCTCGATTGCGTGTTATTCATCGTGATCTTAAAACAAGCAATATTCTCTTGGATGAACAAATGAATCCTAAGATAGCTGATTTTGGCATGGCAAGACTTTTTGGTGTTGACCAAACCCAGGAAAACACAAATAGAATTGTCGGAACCTACGGATATATGGCACCTGAGTATGTAATGCATGGACAATTTTCAGTAAAATCAGATGTCTTTAGTTTTGGTATATTGGTTCTTGAAATTGTAAGTGGTGCAAAAAACAGTGGCATTCGTGATGGGGATAATACAGAATATCTCTTGAGCTTTGCATGGAGAAACTGGAAGGAGGGGACTGCAACAAATATCATAGATCCCACACTAAACAATGATTCACGAAATGAAATGTTGAGATGTATCCATATTGGATTACTTTGTGTTCAAGAGGATATAGCTAGCAGGCCAACCATGGCTTCAGTTGTAGTGATGCTTAATAGTGATTCTGTTACCCTCCCAATGCCTCTTGAACCTGCATTTCATATGGATTGGAGTGACTTTCAAGATACGAACCTGCCATGTTCAGCTCAAGAATTATCTGTCATTGGGGCTTGA 891 0.3805 MVVLVNRKSNKSTTIGIAVGVPIALVLMVFIFICIYLRVRKPDKRFEEVQEEEEEEDKIDITTEQLQFDFNTIHQAKRVQLNWERRYKIVLGIARGILYLYEDSRLRVIHRDLKTSNILLDEQMNPKIADFGMARLFGVDQTQENTNRIVGTYGYMAPEYVMHGQFSVKSDVFSFGILVLEIVSGAKNSGIRDGDNTEYLLSFAWRNWKEGTATNIIDPTLNNDSRNEMLRCIHIGLLCVQEDIASRPTMASVVVMLNSDSVTLPMPLEPAFHMDWSDFQDTNLPCSAQELSVIGA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00194 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 108 120 IPR008271 GO:0004672|GO:0006468
Mepo4g00194 296 SUPERFAMILY Protein kinase-like (PK-like) 70 257 IPR011009 -
Mepo4g00194 296 ProSiteProfiles Protein kinase domain profile. 1 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00194 296 FunFam Cysteine-rich receptor-like protein kinase 28 64 265 - -
Mepo4g00194 296 Pfam Protein kinase domain 54 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00194 296 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 277 - -
Mepo4g00194 296 SMART serkin_6 25 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00194 296 Gene3D Transferase(Phosphotransferase) domain 1 69 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00194 Mepo-Chr4 3315848 3317786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00194 68 272 Receptor kinase-like Gene Family AT4G23230 61.650 2.98e-92 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g00194 Pkinase 8.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00194 - - gmx:100791056 330.102