Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00193 ATGTCAAATGCAGATCAAGCAAAGAAAGCACAATTAAATTGGGAAAGGCGCTACACAATCATTTTAGGTATTGCTCGAGGCATTCTTTACCTCCATGAGGATTCTCGACTGCGTGTTATTCATCGTGATCTCAAAGCAAACAATATTCTCTTAGATAAACGGATGAATCCTAAGATAGCTGATTTTGGCATGGCAAGACTTTTTGGTGTTGAGCAAACCCAGGAAAACACAAATAGAATTGTGGGAACCTATGGGTATATGGCACCAGAGTATGCAAGGCATGGACAATTTTCAACAAAATCAGATGTCTTTAGTTTTGGTATATTAGTTCTTGAAATTGTAAGTGGTACAAAAAATAGTTACATCCGTGATGGGGAGAATACAGAATATCTCTCGAGCTTTGCATGGAGAAATTGGAAGGAGGGGACTGCAACAAATATCATAGATCCCACATTGAACAATGACTCACTAAATGAAATATTGAGATGTATCCATATTGGATTGCTTTGTGTTCAAGAGAATGTAGCTGGCAGACCAACCATGGCTTCTGTTGTAGTGACGCTTAATAGCCCTTCTGTTACTCTCCCAATTCCTTTGCAACCTGCATTTCATATAGGGCCTCAAGATATGAAATCGTCAGGTCATAATTCAGCTCAAGAATCCGTCAATGGGGCTTCAAATACAGAGTTATTTCCTCGCTAG 702 0.3932 MSNADQAKKAQLNWERRYTIILGIARGILYLHEDSRLRVIHRDLKANNILLDKRMNPKIADFGMARLFGVEQTQENTNRIVGTYGYMAPEYARHGQFSTKSDVFSFGILVLEIVSGTKNSYIRDGENTEYLSSFAWRNWKEGTATNIIDPTLNNDSLNEILRCIHIGLLCVQENVAGRPTMASVVVTLNSPSVTLPIPLQPAFHIGPQDMKSSGHNSAQESVNGASNTELFPR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00193 233 Gene3D Transferase(Phosphotransferase) domain 1 2 194 - -
Mepo4g00193 233 Pfam Protein tyrosine and serine/threonine kinase 8 186 IPR001245 GO:0004672|GO:0006468
Mepo4g00193 233 SMART serkin_6 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00193 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Mepo4g00193 233 MobiDBLite consensus disorder prediction 206 233 - -
Mepo4g00193 233 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00193 233 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 223 - -
Mepo4g00193 233 FunFam Cysteine-rich receptor-like protein kinase 28 3 196 - -
Mepo4g00193 233 SUPERFAMILY Protein kinase-like (PK-like) 11 188 IPR011009 -
Mepo4g00193 233 MobiDBLite consensus disorder prediction 210 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00193 Mepo-Chr4 3310881 3312034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00193 5 205 Receptor kinase-like Gene Family AT4G23230 61.881 4.23e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g00193 PK_Tyr_Ser-Thr 7.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00193 - - gmx:100791056 330.872