Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00172 ATGTCTATGTTGGATCTCAATATTGTTTACATCATCCATGTTGATGATAACTCAACCAATGTTCAAAAGAAGTTGCAACTTCTAACTTCTCCATCTCAAATATCAGATTCTAGAACCTCCAACTCTTCTGTTAGGAATCCTTCAGAGGAAGATTCCTCAAACAATTCCTCTCCCTTCATTTTTGACCTGTTGAAGAAAGAAAAAGATGTCTCACAGAGAGTCAAAGAAGAAAATACAGCACAAACAATCACAAGGACCCTTTTCCCTATGAGTGCTGATAGAGGAGGTAGATTATCTGATCATTCCATGATTCAAAGGATGAACTTTGATGATCAAAATGGATACAGTATCTTGCAGCAAAAGCAACCTCAAGTTAGAAAAAGTAGAAGAGGACCAAGGTCTCGAAGCTCGCAGTACCGGGGTGTTACCTTCTACCGTAGGACTGGTCGATGGGAGTCACATATATGGGATTGTGGGAAGCAGGTCTATTTGGGTGGATTTGACACTGCTCATGCTGCTGCAAGAGCATATGATAGGGCAGCTGTTATGTTTAGGGGAGTTGATGCTGATATAAACTTTAATTTAAGTGATATTGAGGATGATTTGAAGCAGATGAGAGGTTTGAGCAAGGAAGAATTTGTCCTAAGACTTCGTAAACAAACCAATGGAAACTCAAAGAGAAGTTCAACATATAGAAGTACACTACCTCTTAACAAATATGGCCAAGGAGATCCACAAATTATTAGACCATTTGTGGCCAAAACATTTTGTCATAAATCACCCATCAAGCGTGATCATGAAGTAGAAACCAGTTTTAAGCCCTCTACTATTTATAAGGGAGAGATAATTGCAAATTCTAACAAAACAGGCACTTTACATAATCTTGATTTGAGTCTAAGGATTTCACCATCTTGGAAAGAATTGAGTAACAATAATTCTGGAGTTGGATTTTCTTCTGGATGTACGGCTTATACGATACCCAAAGAAAGGAGAACAATGGGGAAGGGTTTGGTAAACATTAAAAAAGAAGTTCCATTGCAAGTATTTTCCAACTTGGCCAGGAAGTTTTGCAGTAATGGCAGCAACATTGCATTGGGGTCGTTGAAATCAAATGCAGCAGCATCATCAGGATTCCTTTCATCACCCTCATTTCTTCCAATCACCTCAAATAACAATAATTTGCCTACGATTTTATCATTGGCTCAACCACAATATACTCATAATTAA 1227 0.3814 MSMLDLNIVYIIHVDDNSTNVQKKLQLLTSPSQISDSRTSNSSVRNPSEEDSSNNSSPFIFDLLKKEKDVSQRVKEENTAQTITRTLFPMSADRGGRLSDHSMIQRMNFDDQNGYSILQQKQPQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAVMFRGVDADINFNLSDIEDDLKQMRGLSKEEFVLRLRKQTNGNSKRSSTYRSTLPLNKYGQGDPQIIRPFVAKTFCHKSPIKRDHEVETSFKPSTIYKGEIIANSNKTGTLHNLDLSLRISPSWKELSNNNSGVGFSSGCTAYTIPKERRTMGKGLVNIKKEVPLQVFSNLARKFCSNGSNIALGSLKSNAAASSGFLSSPSFLPITSNNNNLPTILSLAQPQYTHN 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00172 408 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 76 249 - -
Mepo4g00172 408 Pfam AP2 domain 138 185 IPR001471 GO:0003700|GO:0006355
Mepo4g00172 408 Gene3D AP2/ERF domain 137 196 IPR036955 GO:0003700|GO:0006355
Mepo4g00172 408 MobiDBLite consensus disorder prediction 30 58 - -
Mepo4g00172 408 ProSiteProfiles AP2/ERF domain profile. 138 194 IPR001471 GO:0003700|GO:0006355
Mepo4g00172 408 MobiDBLite consensus disorder prediction 112 138 - -
Mepo4g00172 408 FunFam AP2-like ethylene-responsive transcription factor 137 196 - -
Mepo4g00172 408 SMART rav1_2 138 200 IPR001471 GO:0003700|GO:0006355
Mepo4g00172 408 SUPERFAMILY DNA-binding domain 137 195 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00172 Mepo-Chr4 2997843 3005181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00172 3 247 AP2-EREBP Transcription Factor Family AT5G60120 44.928 8.03e-48 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g00172 AP2 3.3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00172 K09284 - gmx:100783626 385.956