Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00168 ATGGAGACAAATTCTGAAGAGGTTCATGTATTGGCTGTTGATGATAGTCTCATTGATCGGAAAGTTATTGAAAGGTTGCTCAAAATTTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATCAGAGCACTGCAATTTTTGGGGTTGGATGAGCAGAGAGAGAAGTCTGAATCTGATGGTTCTGTGCCTTTGAAGGTGGATCTTGTTATTACAGATTATTGCATGCCAGAAATGACTGGTTATGAGTTGCTCAAAAAAATTAAGGAATCGTCCACTTTTAAGGAAATTCCTGTAGTGATCATGTCTTCTGAAAATATTTTGCCCCGCATAGACAGATGTTTGGAAGAAGGTGCAAAGGATTTTATAATAAAGCCAGTGAAATTATGTGATGTGAAACGACTAAAGGGTTACATGACAACAAGGGAGGTTGGAGTAGGAATCAACAACAAACCGAAGCCAGAAGAAGCATGTAATCACTCATCATCACCACATTCCATTTCATCATCACCTTCACCTTCATCATCTCCATTGTCTGCATCCAGTGTGCTTGATTCTCCAATCAGACGGTTTAAAATGACCGACATCGAATGA 591 0.3942 METNSEEVHVLAVDDSLIDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQREKSESDGSVPLKVDLVITDYCMPEMTGYELLKKIKESSTFKEIPVVIMSSENILPRIDRCLEEGAKDFIIKPVKLCDVKRLKGYMTTREVGVGINNKPKPEEACNHSSSPHSISSSPSPSSSPLSASSVLDSPIRRFKMTDIE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00168 196 Gene3D - 8 154 - -
Mepo4g00168 196 Pfam Response regulator receiver domain 10 128 IPR001789 GO:0000160
Mepo4g00168 196 CDD REC_typeA_ARR 10 134 - -
Mepo4g00168 196 MobiDBLite consensus disorder prediction 144 182 - -
Mepo4g00168 196 SMART REC_2 8 134 IPR001789 GO:0000160
Mepo4g00168 196 MobiDBLite consensus disorder prediction 154 182 - -
Mepo4g00168 196 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 154 IPR045279 GO:0009736
Mepo4g00168 196 SUPERFAMILY CheY-like 8 131 IPR011006 -
Mepo4g00168 196 ProSiteProfiles Response regulatory domain profile. 9 139 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00168 Mepo-Chr4 2954901 2957172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00168 4 188 Response Regulator Gene Family AT1G59940 59.406 4.81e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo4g00168 Response_reg 2.2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00168 K14492 - gmx:100787696 255.758