Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00155 ATGTTAGCAATATCCCCTCGGTTTACAACAATTGGATGGCCCTTTGAGGAGCCTTTAAGCCATAACCAGCATCAGAACCACTTCCACACAGACAATATTGATCAATTATTTAATTTTCATGATAAAGTTGAGGCCGAAATTAATTCCACTGATCCCTCACAATGCACAAGCAACGACCTTAGCATGGTCAAGAAGCTTGTTCATAATGCTAGTGAACGCGATCGCCGCAAGAAGATCAATAATTTGTATTCTTCACTTCGTTCACTTCTTCCTGTTTCTGATCAAATGAAGAAATTAAGCATTCCGGGAACAATTTCAAGAGTCCTTAAATACATACCGGAATTACAGAAGCAAGTGGAGGGACTAATTAAGAGAAAGGATGAGATCTTACTGAGACTTTCCCCACAAGTAGATGAGGTGATCATCAACAAAGAATCTCAAAGGAAGAAACATAGTTACAACTCTGGTTTTATAGTTTCAACAAGTAGGCTTAATGATAGTGAAATTACCATTCAGATTTCATGTTACACTGTCCACAAGATTCCATTTTCTGAGATCTTGATGTGTTTGGAAAATGATGGCCTTTTGCTGCTTAATGTTTCTTCATCTCAGACCTTTGGAGGGAGAATTTTCTATAATTTGCATCTCCAGGTGTGTTACTTTCCATAG 669 0.3797 MLAISPRFTTIGWPFEEPLSHNQHQNHFHTDNIDQLFNFHDKVEAEINSTDPSQCTSNDLSMVKKLVHNASERDRRKKINNLYSSLRSLLPVSDQMKKLSIPGTISRVLKYIPELQKQVEGLIKRKDEILLRLSPQVDEVIINKESQRKKHSYNSGFIVSTSRLNDSEITIQISCYTVHKIPFSEILMCLENDGLLLLNVSSSQTFGGRIFYNLHLQVCYFP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00155 222 SMART finulus 69 121 IPR011598 GO:0046983
Mepo4g00155 222 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 63 115 IPR011598 GO:0046983
Mepo4g00155 222 Gene3D - 55 152 IPR036638 GO:0046983
Mepo4g00155 222 Pfam Helix-loop-helix DNA-binding domain 64 116 IPR011598 GO:0046983
Mepo4g00155 222 FunFam Transcription factor ORG2 59 144 - -
Mepo4g00155 222 CDD bHLH_AtORG2_like 64 139 - -
Mepo4g00155 222 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 54 217 - -
Mepo4g00155 222 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 132 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00155 Mepo-Chr4 2816199 2817092 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00155 1 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 45.022 8.06e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g00155 HLH 4.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00155 - - vvi:100262373 236.498